BLASTX nr result

ID: Atractylodes22_contig00033239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033239
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   209   4e-52
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   209   4e-52
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         208   1e-51
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   208   1e-51
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             206   3e-51

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  209 bits (533), Expect = 4e-52
 Identities = 98/152 (64%), Positives = 121/152 (79%)
 Frame = +3

Query: 66   LSGYLDSDWGGDLDDRKSTSGYCFNFGNTACSWCSK*QSIVALSTCEAEYIAAASSACQA 245
            L GY DSDWGGD+DDRKSTSG+ F  G+TA +W SK Q IV LSTCEAEY+AA S  C A
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHA 1249

Query: 246  IWLRQLMTQICIPQREPMKIFVDNVSAISLAKNPVVHGRSKHIDTRYHFLRDQDAKKEIE 425
            IWLR L+ ++ +PQ EP KIFVDN SAI+LAKNPV H RSKHIDTRYH++R+  +KK+++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309

Query: 426  LEYCKSEDQVADILTKPLKYDVFIKLKQKMGM 521
            LEY K+ DQVADI TKPLK + FIK++  +G+
Sbjct: 1310 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  209 bits (533), Expect = 4e-52
 Identities = 98/152 (64%), Positives = 121/152 (79%)
 Frame = +3

Query: 66   LSGYLDSDWGGDLDDRKSTSGYCFNFGNTACSWCSK*QSIVALSTCEAEYIAAASSACQA 245
            L GY DSDWGGD+DDRKSTSG+ F  G+TA +W SK Q IV LSTCEAEY+AA S  C A
Sbjct: 1158 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1217

Query: 246  IWLRQLMTQICIPQREPMKIFVDNVSAISLAKNPVVHGRSKHIDTRYHFLRDQDAKKEIE 425
            IWLR L+ ++ +PQ EP KIFVDN SAI+LAKNPV H RSKHIDTRYH++R+  +KK+++
Sbjct: 1218 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1277

Query: 426  LEYCKSEDQVADILTKPLKYDVFIKLKQKMGM 521
            LEY K+ DQVADI TKPLK + FIK++  +G+
Sbjct: 1278 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  208 bits (529), Expect = 1e-51
 Identities = 97/152 (63%), Positives = 120/152 (78%)
 Frame = +3

Query: 66   LSGYLDSDWGGDLDDRKSTSGYCFNFGNTACSWCSK*QSIVALSTCEAEYIAAASSACQA 245
            L GY DSDWGGD+DDRKSTSG+ F  G+TA +W SK Q IV LSTCEAEY+AA S  C A
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249

Query: 246  IWLRQLMTQICIPQREPMKIFVDNVSAISLAKNPVVHGRSKHIDTRYHFLRDQDAKKEIE 425
            IWLR L+ ++ +PQ EP KIFVDN SAI+LAKNPV H RSKHIDTRYH++R+  +KK+++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309

Query: 426  LEYCKSEDQVADILTKPLKYDVFIKLKQKMGM 521
            LEY K+ DQVAD  TKPLK + FIK++  +G+
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  208 bits (529), Expect = 1e-51
 Identities = 97/152 (63%), Positives = 120/152 (78%)
 Frame = +3

Query: 66   LSGYLDSDWGGDLDDRKSTSGYCFNFGNTACSWCSK*QSIVALSTCEAEYIAAASSACQA 245
            L GY DSDWGGD+DDRKSTSG+ F  G+TA +W SK Q IV LSTCEAEY+AA S  C A
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249

Query: 246  IWLRQLMTQICIPQREPMKIFVDNVSAISLAKNPVVHGRSKHIDTRYHFLRDQDAKKEIE 425
            IWLR L+ ++ +PQ EP KIFVDN SAI+LAKNPV H RSKHIDTRYH++R+  +KK+++
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309

Query: 426  LEYCKSEDQVADILTKPLKYDVFIKLKQKMGM 521
            LEY K+ DQVAD  TKPLK + FIK++  +G+
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  206 bits (525), Expect = 3e-51
 Identities = 97/152 (63%), Positives = 120/152 (78%)
 Frame = +3

Query: 66   LSGYLDSDWGGDLDDRKSTSGYCFNFGNTACSWCSK*QSIVALSTCEAEYIAAASSACQA 245
            L GY DSDWG D+DDRKSTSG+ F  G+TA +W SK Q IV LSTCEAEY+AA S  C A
Sbjct: 1129 LVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1188

Query: 246  IWLRQLMTQICIPQREPMKIFVDNVSAISLAKNPVVHGRSKHIDTRYHFLRDQDAKKEIE 425
            IWLR L+ ++ +PQ EP KIFVDN SAI+LAKNPV H RSKHIDTRYH++R+  +KK+++
Sbjct: 1189 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1248

Query: 426  LEYCKSEDQVADILTKPLKYDVFIKLKQKMGM 521
            LEY K+ DQVADI TKPLK + FIK++  +G+
Sbjct: 1249 LEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1280


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