BLASTX nr result

ID: Atractylodes22_contig00033100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033100
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...    80   5e-13
emb|CBI35366.3| unnamed protein product [Vitis vinifera]               80   8e-13
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...    68   3e-09
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    56   1e-05

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Vitis vinifera]
          Length = 1013

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 77/228 (33%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
 Frame = +3

Query: 336 STSRVLPAWASSSSDTGLRPST---QRPLSSKRESALNG------HXXXXXXXXXXXXFI 488
           + SR+LP W S+S       S    Q+  S KR SA NG      H              
Sbjct: 34  ANSRILPPWPSTSGTNSKSTSHGHFQKVPSPKRASASNGSSSNFYHYPPKIQMHPSFDDD 93

Query: 489 ARQDERNKV-------FSSNGTEFD----NQLLQ--------------KDAKTKRMLPSY 593
            R   R+          + NG   D     QL+                    +R LPS 
Sbjct: 94  IRASNRHNFREADFNYSTENGDMLDVENHQQLINLNKADIFGADYEKLSQPAMRRTLPST 153

Query: 594 LQTSSSNFRRNLPVKDVGSSQIHENYGKPYPPAISSHTNLR-LQENFHRANYD-VAMKNY 767
           LQ S+ +   N  V ++GSS IH++ GK + P      N+  ++E+F R N D V M   
Sbjct: 154 LQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYMKEHFGRGNDDEVIMYEN 213

Query: 768 HGSRVLPPSM----SGLATQYGGRSD-PYRPGVVQETAA--DERLIYQ 890
            GSR+LPPS+    S  +TQYGG S+  YRPGV +E AA  DERL+YQ
Sbjct: 214 SGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANTDERLVYQ 261


>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 9/115 (7%)
 Frame = +3

Query: 573 KRMLPSYLQTSSSNFRRNLPVKDVGSSQIHENYGKPYPPAISSHTNLR-LQENFHRANYD 749
           +R LPS LQ S+ +   N  V ++GSS IH++ GK + P      N+  ++E+F R N D
Sbjct: 143 RRTLPSTLQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYMKEHFGRGNDD 202

Query: 750 -VAMKNYHGSRVLPPSM----SGLATQYGGRSD-PYRPGVVQETAA--DERLIYQ 890
            V M    GSR+LPPS+    S  +TQYGG S+  YRPGV +E AA  DERL+YQ
Sbjct: 203 EVIMYENSGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANTDERLVYQ 257


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 67/212 (31%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
 Frame = +3

Query: 342 SRVLPAWAS----SSSDTGLRPSTQRPLSSKRESALNGHXXXXXXXXXXXX--FIARQDE 503
           SR+LP WA+     S  +G    TQR  S KR  + NG                 ++ D+
Sbjct: 33  SRILPPWAAIATTDSRSSGYGRQTQRDTSPKRPYSSNGSSSNWHSSNGGSSNWHTSQADD 92

Query: 504 ----------------RNKVFSSNGTEFDNQLLQKDAKTKRMLPSYLQTSSSNFRRNLPV 635
                            +++ +  GT+++   L      KR LPS L  S  +   N  V
Sbjct: 93  SLYAIGNGNAGLPRTVNSRIANVYGTDYEK--LSSQQALKRTLPSSLHRSPISSISNSLV 150

Query: 636 KDVGSSQIHENYGKPYPPAISSHTNLRLQENFHRANYDVAMKNY-HGSRVLPPS-MSGLA 809
           + V SSQ  + YG  Y PA  S ++    + F R NY+ A+    +GSR LPPS M G +
Sbjct: 151 EGVSSSQTRDIYGNAYHPAGPSSSH---SKGFGRGNYEEAITYVSNGSRTLPPSLMRGKS 207

Query: 810 T---QYGGRSDPYRPGVVQETAA--DERLIYQ 890
           T   Q+G R   + P   +E  A  DERLIYQ
Sbjct: 208 TPSAQFGLRDPAFHPMAGEEGVAGSDERLIYQ 239


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
 Frame = +3

Query: 522 SNGTEFDNQLLQKDAKTKRMLPSYLQTSSSNFRRNLPVKDVGSSQIHENYGKPYPPAISS 701
           +N +  D + L      KR LPS L  S  + + N  V++  SS   + YG  Y  A  S
Sbjct: 46  ANVSGADYEKLSSQQALKRTLPSSLHPSEPSNKANNTVENASSSGSRDIYGNAYHLAGPS 105

Query: 702 HTNLR-LQENFH--RANYDVAMKNYHGSRVLPPS-MSGL-ATQYGGRSDP-YRPGVVQET 863
            TN R    + H  R N D+ M   +GSR+ PPS M G  + Q+ G S+P Y      E 
Sbjct: 106 VTNSRGYTRDIHSKRNNDDIMMYENNGSRIPPPSFMHGKPSAQFPGPSEPVYHSMAGDEN 165

Query: 864 AA--DERLIYQ 890
           AA  DERL+YQ
Sbjct: 166 AAGTDERLVYQ 176


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