BLASTX nr result

ID: Atractylodes22_contig00030939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030939
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    94   9e-18
ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    69   3e-10
ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    69   5e-10
ref|XP_002520991.1| ring finger protein, putative [Ricinus commu...    67   2e-09
ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   SKSSKFTSQGSAVKSASQHTPKSEGHGRKPKGKDQLKRSKFQDENGRSDVDVTESAXXXX 182
           +KS KF SQGSAVKS   H P  E   RK K K+  ++SK QDE   +     ES     
Sbjct: 227 TKSLKFNSQGSAVKSEPMHVPDGESQVRKTKVKEHGRKSKVQDEKISTTPVSAESVKPKK 286

Query: 183 XXXXXXXXAGSLGESGVATLQAVLDADANNAAREKRIINAIWFHLVPSEEQEGE-PLGRI 359
                   A + GE G++  QAVL+A  N+    KR   +IWF LV SE+QEG+  L +I
Sbjct: 287 LCRVRRRRAAAFGELGISP-QAVLNAVNNH----KRRTGSIWFSLVASEDQEGDASLPQI 341

Query: 360 EGSFVRIKDVNIPVSLI 410
             +F+RIKDVN+PVS I
Sbjct: 342 SSNFLRIKDVNVPVSFI 358


>ref|XP_003553481.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 428

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   SKSSKFTSQGSAVKSASQHTPKSEGHGRKPKGKDQLKRSKFQDENGRSDVDVTESAXXXX 182
           SKS K    GS  K  +    +S+    K K K+  +++K +DE        +++A    
Sbjct: 225 SKSFKSNILGSDAKLETNQVNESDSQVLKIKNKENKRKAKIEDEKSSPYPVSSDTAKPNK 284

Query: 183 XXXXXXXXAGSLGESGVATLQAVLDADANNAAREKRIINAIWFHLVPSEEQEGE-PLGRI 359
                     + GESG++  QAVLD+ +N  +R       IWF LV SE QEG+ PL +I
Sbjct: 285 LRRIRKKKEPASGESGISP-QAVLDSASNRLSRT----GPIWFSLVASENQEGDDPLPQI 339

Query: 360 EGSFVRIKDVNIPVSLI 410
             S++RIKD ++PVS I
Sbjct: 340 PASYLRIKDGSVPVSFI 356


>ref|XP_003520583.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 445

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   SKSSKFTS---QGSAVKSASQHTPKSEGHGRKPKGKDQLKRSKFQDENGRSDVDVTESAX 173
           S+S  F S   QGS  K  +    +S+   +K K K+  +++K +DE        +++A 
Sbjct: 239 SRSKSFKSNNVQGSDAKLETNQVNESDSQVQKTKNKENKRKAKIEDEKSSPYPVSSDTAK 298

Query: 174 XXXXXXXXXXXAGSLGESGVATLQAVLDADANNAAREKRIINAIWFHLVPSEEQEGE-PL 350
                        + GESG++  QAVLD+ +N  +R       IWF LV SE QEG+ PL
Sbjct: 299 PNKLRRIRKKKETASGESGISP-QAVLDSASNRLSR----TGPIWFSLVASENQEGDAPL 353

Query: 351 GRIEGSFVRIKDVNIPVSLI 410
            +I  S++RIKD +I VS I
Sbjct: 354 PQIPASYLRIKDGSISVSFI 373


>ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
           gi|223539828|gb|EEF41408.1| ring finger protein,
           putative [Ricinus communis]
          Length = 520

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3   SKSSKFTSQGSAVKSASQHTPKSEGHGRKPK-GKDQLKRSKFQDENGRSDVDV-TESAXX 176
           SKS K      A + A+Q      GH  +P+  K + K  K + E+ ++++D  +++A  
Sbjct: 226 SKSFKSIQVSDAKQEATQ------GHENEPQVRKTKFKEEKLKVEDEKNNIDTPSDAAGP 279

Query: 177 XXXXXXXXXXAGSLGESGVATLQAVLDADANNAAREKRIINAIWFHLVPSEEQEGE-PLG 353
                     A + G+SG+++ QAVL+A + N   EKR    +WF LV SE+QEG+ PL 
Sbjct: 280 KRLRRIRRKKAANFGDSGISS-QAVLNAASVN--HEKRA-GPVWFSLVASEDQEGDAPLP 335

Query: 354 RIEGSFVRIKDVNIPVSLI 410
           +I  +++RIKD N+PVS I
Sbjct: 336 QIPANYLRIKDGNLPVSFI 354


>ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|222856270|gb|EEE93817.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   SKSSKFTSQGSAVKSASQHTPKSEGHGRKPKGKDQLKRSKFQDENGRSDVDVTESAXXXX 182
           +KS K   Q +  K  S+   ++E    K K K+   +SK +DE    D +V+E      
Sbjct: 232 TKSFKSIPQVNDAKLESRPVRENEPQVHKTKFKENKDKSKVKDEKNNID-NVSEGTVEPK 290

Query: 183 XXXXXXXXAGSLGESGVATLQAVLDADANNAAREKRIINAIWFHLVPSEEQEGE-PLGRI 359
                     +  +    +  AVL   A   A+++R    +WF L+ SEEQEG+ PL +I
Sbjct: 291 RLRRIRRKKAAFNDVSGISSPAVLHTAA---AKQERRSGPVWFSLLASEEQEGDAPLPQI 347

Query: 360 EGSFVRIKDVNIPVSLI 410
             S++R+KD N+PVS I
Sbjct: 348 PSSYLRLKDGNVPVSFI 364


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