BLASTX nr result

ID: Atractylodes22_contig00030726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030726
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   164   9e-39
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   162   3e-38
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   153   2e-35

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  176 bits (446), Expect = 2e-42
 Identities = 92/133 (69%), Positives = 108/133 (81%), Gaps = 1/133 (0%)
 Frame = +2

Query: 8    LLSKASKTLEIYMVKDSEINKGSSLLTPP-SGTRKGNRSSTTMSRLLAQAVAAVYTIGSL 184
            LLSKAS+ LE Y+  DSE NKG +  TPP S TRKG R++  +SRLL++AV AVY+IG L
Sbjct: 706  LLSKASRILEKYITGDSETNKGDAFFTPPRSATRKGKRAAA-LSRLLSEAVTAVYSIGFL 764

Query: 185  VIVFPSADLKGIVPILHNIITSGISDPKLKKLPAMSVSVKQTAPSLYIQAWLTMGKICLA 364
            VI+ PSAD   I+P+LH IITSG SDPKL KLP   VS+KQTAPSLYIQAWLTMGKICLA
Sbjct: 765  VIICPSADTSTIIPLLHTIITSGNSDPKLSKLPGPQVSLKQTAPSLYIQAWLTMGKICLA 824

Query: 365  DDKLAKRYMPLFV 403
            D++LAKRY+PLFV
Sbjct: 825  DEELAKRYIPLFV 837


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/132 (62%), Positives = 97/132 (73%)
 Frame = +2

Query: 8    LLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRSSTTMSRLLAQAVAAVYTIGSLV 187
            +LS+ASK LE Y+  + E N  +S  TPP   +   +    M RLL++ V A YTIGSLV
Sbjct: 746  VLSRASKMLEKYISGNVEANNINSFFTPPRSQKSNGKRGAAMCRLLSEVVTAAYTIGSLV 805

Query: 188  IVFPSADLKGIVPILHNIITSGISDPKLKKLPAMSVSVKQTAPSLYIQAWLTMGKICLAD 367
            IV PS D+  +VP+LH IITSG SDPKL KLP   VS+KQTAPSLYIQAWLTMGKICLAD
Sbjct: 806  IVCPSVDVSSVVPVLHTIITSGNSDPKLSKLPGPRVSLKQTAPSLYIQAWLTMGKICLAD 865

Query: 368  DKLAKRYMPLFV 403
             KLAKRY+PLFV
Sbjct: 866  GKLAKRYIPLFV 877


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/134 (61%), Positives = 101/134 (75%)
 Frame = +2

Query: 2    HPLLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRSSTTMSRLLAQAVAAVYTIGS 181
            H LLSKAS+ L+ Y+ + SE N  S   TPP G R+  R++ TMSR L++A+ AVYTIGS
Sbjct: 744  HKLLSKASQILDKYISEASEANIDSDFRTPPGGARRKGRTALTMSRSLSRAITAVYTIGS 803

Query: 182  LVIVFPSADLKGIVPILHNIITSGISDPKLKKLPAMSVSVKQTAPSLYIQAWLTMGKICL 361
            LVI+ PSA+L  I+PILH IITSG SD KL KL   +  +KQ APSLYI AW+TMGKICL
Sbjct: 804  LVIICPSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLKQAAPSLYIHAWVTMGKICL 863

Query: 362  ADDKLAKRYMPLFV 403
            AD +LAKRY+PLFV
Sbjct: 864  ADGELAKRYIPLFV 877


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/134 (61%), Positives = 101/134 (75%)
 Frame = +2

Query: 2    HPLLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRSSTTMSRLLAQAVAAVYTIGS 181
            H LLSKAS+ L+ Y+ + SE N  S   TPP G R+  R++ TMSR L++A+ AVYTIGS
Sbjct: 785  HKLLSKASQILDKYISEASEANIDSDFRTPPGGARRKGRTALTMSRSLSRAITAVYTIGS 844

Query: 182  LVIVFPSADLKGIVPILHNIITSGISDPKLKKLPAMSVSVKQTAPSLYIQAWLTMGKICL 361
            LVI+ PSA+L  I+PILH IITSG SD KL KL   +  +KQ APSLYI AW+TMGKICL
Sbjct: 845  LVIICPSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLKQAAPSLYIHAWVTMGKICL 904

Query: 362  ADDKLAKRYMPLFV 403
            AD +LAKRY+PLFV
Sbjct: 905  ADGELAKRYIPLFV 918


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  153 bits (386), Expect = 2e-35
 Identities = 79/135 (58%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2    HPLLSKASKTLEIYMVKDSEINKGSSLLTPP-SGTRKGNRSSTTMSRLLAQAVAAVYTIG 178
            H +LS+AS  +E ++ ++SE N   S  TPP SGTRKG R S   S+ L++A+ A+YT+G
Sbjct: 759  HQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTRKG-RKSVAKSKALSKAITAIYTVG 817

Query: 179  SLVIVFPSADLKGIVPILHNIITSGISDPKLKKLPAMSVSVKQTAPSLYIQAWLTMGKIC 358
            SLVIV PSAD+  +VP+LH IITSG S P L KLP  S S++Q APS YIQ WL MGK+C
Sbjct: 818  SLVIVCPSADMSNVVPLLHTIITSGSSGPILNKLPGPSTSLQQEAPSFYIQGWLAMGKLC 877

Query: 359  LADDKLAKRYMPLFV 403
            LAD KLAK Y+PLFV
Sbjct: 878  LADGKLAKNYIPLFV 892


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