BLASTX nr result

ID: Atractylodes22_contig00030674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030674
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   158   5e-37
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   149   3e-34
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   147   7e-34
ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic su...   143   1e-32

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/97 (79%), Positives = 84/97 (86%)
 Frame = -2

Query: 291 SASVICCHKAKIDIPMLASEWTERGMLSHFTVVRKLEDGLFPMGFKDEADDRNFKAGSDI 112
           SASVICCH AKID PML SEWT+ GMLSHFTVVRKLE G+FPMGF  EA +RN KAGS++
Sbjct: 615 SASVICCHSAKIDAPMLTSEWTKPGMLSHFTVVRKLEGGIFPMGFTKEAAERNTKAGSNV 674

Query: 111 IFMESSERALLNRLMIELHKLYSDILVGHNISGFGLD 1
           I  ESSERALLNRLMIELHKL SD+L+GHNISGF LD
Sbjct: 675 ISFESSERALLNRLMIELHKLESDVLIGHNISGFDLD 711


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/97 (77%), Positives = 82/97 (84%)
 Frame = -2

Query: 291 SASVICCHKAKIDIPMLASEWTERGMLSHFTVVRKLEDGLFPMGFKDEADDRNFKAGSDI 112
           SASVICCHKAKID PMLASEW + GMLSHFTVVRKL+ G+FPMGF  E  DRN  AGS++
Sbjct: 364 SASVICCHKAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTDRNTMAGSNV 423

Query: 111 IFMESSERALLNRLMIELHKLYSDILVGHNISGFGLD 1
           + +ESSERALLNRLMI LHKL SD LVGHNISGF LD
Sbjct: 424 LAIESSERALLNRLMIALHKLDSDFLVGHNISGFDLD 460


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/97 (74%), Positives = 84/97 (86%)
 Frame = -2

Query: 291 SASVICCHKAKIDIPMLASEWTERGMLSHFTVVRKLEDGLFPMGFKDEADDRNFKAGSDI 112
           SAS+ICCHKAKID PMLASEW + GMLSHFTVVRKL+ G+FPMGF  E  +RN +AGS++
Sbjct: 578 SASLICCHKAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTERNTQAGSNV 637

Query: 111 IFMESSERALLNRLMIELHKLYSDILVGHNISGFGLD 1
           + +ESSERALLNRLMI L+KL SD+LVGHNISGF LD
Sbjct: 638 LGIESSERALLNRLMIALNKLDSDVLVGHNISGFDLD 674


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/97 (74%), Positives = 81/97 (83%)
 Frame = -2

Query: 291 SASVICCHKAKIDIPMLASEWTERGMLSHFTVVRKLEDGLFPMGFKDEADDRNFKAGSDI 112
           SASVICCHK KID PML SEW   G+LSHFTVVRKL+ G+FPMGF  EA DRN KAG+++
Sbjct: 580 SASVICCHKVKIDSPMLPSEWKRPGVLSHFTVVRKLDGGIFPMGFTKEASDRNSKAGANV 639

Query: 111 IFMESSERALLNRLMIELHKLYSDILVGHNISGFGLD 1
           +  E SERALLNRLMIEL+KL SD+LVGHNISGF LD
Sbjct: 640 LCSEISERALLNRLMIELYKLDSDVLVGHNISGFDLD 676


>ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 1027

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/97 (71%), Positives = 81/97 (83%)
 Frame = -2

Query: 291 SASVICCHKAKIDIPMLASEWTERGMLSHFTVVRKLEDGLFPMGFKDEADDRNFKAGSDI 112
           SASVICC +AKID PMLA+EW + GML HFTV+RKL+ G+FPMGF  E+ DRN KAGS++
Sbjct: 83  SASVICCQRAKIDGPMLATEWKKPGMLRHFTVIRKLDGGIFPMGFAKESTDRNSKAGSNV 142

Query: 111 IFMESSERALLNRLMIELHKLYSDILVGHNISGFGLD 1
           +  E +ERALLNRLMIEL KL SD+LVGHNISGF LD
Sbjct: 143 LICEGNERALLNRLMIELFKLDSDVLVGHNISGFDLD 179


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