BLASTX nr result

ID: Atractylodes22_contig00030588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030588
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   209   4e-52
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   209   5e-52
ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   207   2e-51
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   206   3e-51
ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50

>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  209 bits (533), Expect = 4e-52
 Identities = 101/134 (75%), Positives = 105/134 (78%)
 Frame = +2

Query: 32  AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGIISV 211
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65

Query: 212 MDPARSWAARWLRIGKYVPGCXXXXXXXXXXXXXXXXXXGKYVPGCYTLAVSEALPEDLQ 391
           MDP RSWAARWLRIG++                         VPGCYTLAVSEALPEDLQ
Sbjct: 66  MDPTRSWAARWLRIGRF-------------------------VPGCYTLAVSEALPEDLQ 100

Query: 392 GICEEERVQYNPPK 433
            +CEEERVQYNPPK
Sbjct: 101 ALCEEERVQYNPPK 114


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  209 bits (532), Expect = 5e-52
 Identities = 101/138 (73%), Positives = 108/138 (78%)
 Frame = +2

Query: 20  MTTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTG 199
           M+ AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNF G
Sbjct: 1   MSNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNG 60

Query: 200 IISVMDPARSWAARWLRIGKYVPGCXXXXXXXXXXXXXXXXXXGKYVPGCYTLAVSEALP 379
           IIS+MDP+RSWAARWLRIG++                         VPGCYTLAVSEALP
Sbjct: 61  IISMMDPSRSWAARWLRIGRF-------------------------VPGCYTLAVSEALP 95

Query: 380 EDLQGICEEERVQYNPPK 433
           EDLQ +CEEERVQY PPK
Sbjct: 96  EDLQNLCEEERVQYVPPK 113


>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  207 bits (526), Expect = 2e-51
 Identities = 100/137 (72%), Positives = 107/137 (78%)
 Frame = +2

Query: 23  TTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGI 202
           + AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNFTGI
Sbjct: 3   SAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGI 62

Query: 203 ISVMDPARSWAARWLRIGKYVPGCXXXXXXXXXXXXXXXXXXGKYVPGCYTLAVSEALPE 382
           ISVMDP+RSWAARWLRIG++                         VPGCYTLAVSEALPE
Sbjct: 63  ISVMDPSRSWAARWLRIGRF-------------------------VPGCYTLAVSEALPE 97

Query: 383 DLQGICEEERVQYNPPK 433
           DLQ +CE+ERV Y PPK
Sbjct: 98  DLQNLCEDERVPYIPPK 114


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  206 bits (525), Expect = 3e-51
 Identities = 100/134 (74%), Positives = 105/134 (78%)
 Frame = +2

Query: 32  AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGIISV 211
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV +CTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFNGIISV 65

Query: 212 MDPARSWAARWLRIGKYVPGCXXXXXXXXXXXXXXXXXXGKYVPGCYTLAVSEALPEDLQ 391
           MDPARSWAARWLRIG++                         VPGCYTLAVSEALPEDLQ
Sbjct: 66  MDPARSWAARWLRIGRF-------------------------VPGCYTLAVSEALPEDLQ 100

Query: 392 GICEEERVQYNPPK 433
            +CEEERVQY PPK
Sbjct: 101 NLCEEERVQYAPPK 114


>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  204 bits (518), Expect = 2e-50
 Identities = 99/137 (72%), Positives = 106/137 (77%)
 Frame = +2

Query: 23  TTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGI 202
           + AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMDED+ERV DCTTPNFTGI
Sbjct: 3   SAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPNFTGI 62

Query: 203 ISVMDPARSWAARWLRIGKYVPGCXXXXXXXXXXXXXXXXXXGKYVPGCYTLAVSEALPE 382
           ISVMDP+RSWAARWLRIG++                         VPGCYTLAVSEALPE
Sbjct: 63  ISVMDPSRSWAARWLRIGRF-------------------------VPGCYTLAVSEALPE 97

Query: 383 DLQGICEEERVQYNPPK 433
           DLQ +CE+ERV Y PPK
Sbjct: 98  DLQNLCEDERVPYIPPK 114


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