BLASTX nr result
ID: Atractylodes22_contig00030563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00030563
(848 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi... 364 2e-98
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 358 6e-97
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,... 353 3e-95
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2... 340 2e-91
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar... 335 8e-90
>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 364 bits (934), Expect = 2e-98
Identities = 174/281 (61%), Positives = 223/281 (79%)
Frame = +1
Query: 4 SFTVKHILLKLQNDYAISLKFFKWVEQHNPNLLTLETNCIILHILTKNRKFVSAESVLKK 183
+F VKHILLK Q DY +SL+FF WV NP+ TLET+CIILHILTK RKF SAES+L+
Sbjct: 81 AFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRS 140
Query: 184 FVGSCDVGMHSKLFDAILHSYRMCDSTPRVFDALFKMYAQMK*FRNATDTFCRMKEYGFL 363
+ SC + SKLF+++L+SYR+CDS+P VFD LFK +A +K FRNA+DTFCRMK+YGFL
Sbjct: 141 IIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFL 200
Query: 364 PTIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEKAVKV 543
PT+ESCN Y+SSLL+ +R IALA Y+EMRRS+I N TLN+VI A C+LG+L+KA V
Sbjct: 201 PTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVV 260
Query: 544 FDEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIHGFCK 723
F+EM MGF+P V+SYNTLIAGY N+ LL++AMKL+ MEKN + P+ +T+NTL++GFCK
Sbjct: 261 FEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCK 320
Query: 724 EGKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
GKL +A K+F EMK M ++P TVTYN LI+G+ +AG EM
Sbjct: 321 VGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEM 361
Score = 108 bits (269), Expect = 2e-21
Identities = 58/174 (33%), Positives = 91/174 (52%)
Frame = +1
Query: 322 ATDTFCRMKEYGFLPTIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVIN 501
A F M GF P + S N ++ + A+ L M ++ + +V+T N ++N
Sbjct: 257 ANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVN 316
Query: 502 AFCQLGKLEKAVKVFDEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINP 681
FC++GKL++A K+F EM+GM +P +YN LI GY +L M + ++
Sbjct: 317 GFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKA 376
Query: 682 NAITYNTLIHGFCKEGKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTE 843
+ +TYN LI G CKEGK A + E+ G+ PN T++ LI G C ++E
Sbjct: 377 DILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSE 430
Score = 75.5 bits (184), Expect = 1e-11
Identities = 48/190 (25%), Positives = 87/190 (45%)
Frame = +1
Query: 274 FDALFKMYAQMK*FRNATDTFCRMKEYGFLPTIESCNLYMSSLLSLNRAGIALALYKEMR 453
F+ L + ++ + A+ F MK PT + N+ ++ + L++EM
Sbjct: 311 FNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMS 370
Query: 454 RSKIIVNVLTLNMVINAFCQLGKLEKAVKVFDEMEGMGFNPFVSSYNTLIAGYVNQSLLT 633
R ++ ++LT N +I C+ GK +KA + E++ G P S+++ LI G Q
Sbjct: 371 RFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSE 430
Query: 634 AAMKLKVTMEKNRINPNAITYNTLIHGFCKEGKLHDAYKVFTEMKSMGVAPNTVTYNTLI 813
A ++ +M K+ P T+ L+ FC+ A ++ EM + AP+ L
Sbjct: 431 RAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELC 490
Query: 814 SGFCQAGKTE 843
+G Q GK +
Sbjct: 491 AGLGQCGKVK 500
>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 358 bits (920), Expect = 6e-97
Identities = 171/280 (61%), Positives = 220/280 (78%)
Frame = +1
Query: 7 FTVKHILLKLQNDYAISLKFFKWVEQHNPNLLTLETNCIILHILTKNRKFVSAESVLKKF 186
+ +KHI+LK++ D+ +S +FF WV+ NPN TLET IILHILTKN KF SAESVLK
Sbjct: 158 YRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGI 217
Query: 187 VGSCDVGMHSKLFDAILHSYRMCDSTPRVFDALFKMYAQMK*FRNATDTFCRMKEYGFLP 366
+GS + SKLF+AIL+SYR+CDS+P VFD+LFK YAQMK RNA D FC+MK+YGFLP
Sbjct: 218 LGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLP 277
Query: 367 TIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEKAVKVF 546
+ESCN Y+S+ +SL R IAL Y+EM+R +I NV TLNMV+ AFC+ GKLEKA++VF
Sbjct: 278 RVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVF 337
Query: 547 DEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIHGFCKE 726
ME MGF+P ++SYNTLIAGY N+ LL + MKLK+ MEKN + P+ +T+NTLI+GFC+
Sbjct: 338 KRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRG 397
Query: 727 GKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
GKLH+A K+F+EMK+ V PNT+TYNTLI+G+ Q G +EM
Sbjct: 398 GKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEM 437
>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 353 bits (906), Expect = 3e-95
Identities = 175/280 (62%), Positives = 217/280 (77%)
Frame = +1
Query: 7 FTVKHILLKLQNDYAISLKFFKWVEQHNPNLLTLETNCIILHILTKNRKFVSAESVLKKF 186
F VKHILLK+Q D+ +SL+FF WV+ NP+ TLET+ +ILHILTKNRKF SAE +LK
Sbjct: 60 FRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSV 119
Query: 187 VGSCDVGMHSKLFDAILHSYRMCDSTPRVFDALFKMYAQMK*FRNATDTFCRMKEYGFLP 366
+ + + KLF+AIL+SYRMCDS+PRVFD+LFK A MK FRNATDTF +MK YGFLP
Sbjct: 120 LVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLP 179
Query: 367 TIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEKAVKVF 546
T+ESCN Y+SSLL L+R IALA YKEMRR +I NV T NMV+ AFC+ GKLEKAV+VF
Sbjct: 180 TVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVF 239
Query: 547 DEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIHGFCKE 726
+EME +G +P +SYNTLI GY + LL +A+KLK +M + N +T+N+LI GFCKE
Sbjct: 240 EEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKE 299
Query: 727 GKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
GKLH+A KVF+EMK + VAPNT+TYNTLI+G Q G +EM
Sbjct: 300 GKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEM 339
Score = 80.1 bits (196), Expect = 6e-13
Identities = 48/191 (25%), Positives = 87/191 (45%)
Frame = +1
Query: 274 FDALFKMYAQMK*FRNATDTFCRMKEYGFLPTIESCNLYMSSLLSLNRAGIALALYKEMR 453
F++L + + A+ F MK P + N ++ + + + LY+EM
Sbjct: 289 FNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMS 348
Query: 454 RSKIIVNVLTLNMVINAFCQLGKLEKAVKVFDEMEGMGFNPFVSSYNTLIAGYVNQSLLT 633
R+ + ++LT N +I C+ GK +KA + E++ P S+++ LI+G ++
Sbjct: 349 RNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSD 408
Query: 634 AAMKLKVTMEKNRINPNAITYNTLIHGFCKEGKLHDAYKVFTEMKSMGVAPNTVTYNTLI 813
A +L +M + +PN T+N L+ FCK A+ V EM P + + +
Sbjct: 409 RAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIY 468
Query: 814 SGFCQAGKTEM 846
G C GK +
Sbjct: 469 HGLCCCGKEHL 479
>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 340 bits (873), Expect = 2e-91
Identities = 168/280 (60%), Positives = 209/280 (74%)
Frame = +1
Query: 7 FTVKHILLKLQNDYAISLKFFKWVEQHNPNLLTLETNCIILHILTKNRKFVSAESVLKKF 186
F V HILLK+Q D+ +SL+FF ++ NP LTLET+ IILHILTK KF SA+S+L+
Sbjct: 43 FRVNHILLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTL 102
Query: 187 VGSCDVGMHSKLFDAILHSYRMCDSTPRVFDALFKMYAQMK*FRNATDTFCRMKEYGFLP 366
+ S + + KLFD +L SYRMCDS+PRVFD+LFK YA M FRNATD F RMK+YGFLP
Sbjct: 103 LASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLP 162
Query: 367 TIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEKAVKVF 546
T+ESCN Y+SSLL +R IAL Y+EMRR +I N T N+V++A C+ GKLEKAV+V
Sbjct: 163 TVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVL 222
Query: 547 DEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIHGFCKE 726
EME +G P V SYNTLIAG+ N+ LL+ A KLK M KN + PN +T+N+LIHGFCKE
Sbjct: 223 REMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKE 282
Query: 727 GKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
GKLH+A + F+EMK M V PNTVTYNTLI+G+ Q G + M
Sbjct: 283 GKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNM 322
Score = 79.0 bits (193), Expect = 1e-12
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 20/285 (7%)
Frame = +1
Query: 52 ISLKFFKWVEQH--NPNLLTLETNCIILHILTKNRKFVSAESVLKKF------------- 186
I+L F++ + + +PN T ++L L K+ K A VL++
Sbjct: 182 IALTFYREMRRCRISPNSYTFN---LVLSALCKSGKLEKAVEVLREMESVGITPNVVSYN 238
Query: 187 ---VGSCDVGMHSKLFDAILHSYRMCDSTPRV--FDALFKMYAQMK*FRNATDTFCRMKE 351
G C+ G+ S + + + P V F++L + + A F MK
Sbjct: 239 TLIAGHCNKGLLS-IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKV 297
Query: 352 YGFLPTIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEK 531
P + N ++ + + +A +Y+EM R+ + ++LT N +I C+ GK +K
Sbjct: 298 MNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKK 357
Query: 532 AVKVFDEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIH 711
A + E++ P S+Y+ LI+G + A +L +M ++ +PN T+ L
Sbjct: 358 AAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTS 417
Query: 712 GFCKEGKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
F K A+ V +M + +A ++ T + G CQ GK +
Sbjct: 418 AFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENL 462
>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
thaliana] gi|7269520|emb|CAB79523.1| putative protein
[Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 335 bits (859), Expect = 8e-90
Identities = 163/282 (57%), Positives = 214/282 (75%)
Frame = +1
Query: 1 NSFTVKHILLKLQNDYAISLKFFKWVEQHNPNLLTLETNCIILHILTKNRKFVSAESVLK 180
+SF VK++LLK+Q DY +SL+FF W + NP +LET+ I+LH LTKNRKF SAES+L+
Sbjct: 80 DSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILR 139
Query: 181 KFVGSCDVGMHSKLFDAILHSYRMCDSTPRVFDALFKMYAQMK*FRNATDTFCRMKEYGF 360
+ + V + +K+FDA+L+SYR CDSTPRVFD+LFK +A +K FRNATDTF +MK+YGF
Sbjct: 140 DVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGF 199
Query: 361 LPTIESCNLYMSSLLSLNRAGIALALYKEMRRSKIIVNVLTLNMVINAFCQLGKLEKAVK 540
LPT+ESCN YMSSLL R IAL Y+EMRR KI N TLNMV++ +C+ GKL+K ++
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 541 VFDEMEGMGFNPFVSSYNTLIAGYVNQSLLTAAMKLKVTMEKNRINPNAITYNTLIHGFC 720
+ +ME +GF SYNTLIAG+ + LL++A+KLK M K+ + PN +T+NTLIHGFC
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 721 KEGKLHDAYKVFTEMKSMGVAPNTVTYNTLISGFCQAGKTEM 846
+ KL +A KVF EMK++ VAPNTVTYNTLI+G+ Q G EM
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/191 (22%), Positives = 83/191 (43%)
Frame = +1
Query: 274 FDALFKMYAQMK*FRNATDTFCRMKEYGFLPTIESCNLYMSSLLSLNRAGIALALYKEMR 453
F+ L + + + A+ F MK P + N ++ +A Y++M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 454 RSKIIVNVLTLNMVINAFCQLGKLEKAVKVFDEMEGMGFNPFVSSYNTLIAGYVNQSLLT 633
+ I ++LT N +I C+ K KA + E++ P S+++ LI G +
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 634 AAMKLKVTMEKNRINPNAITYNTLIHGFCKEGKLHDAYKVFTEMKSMGVAPNTVTYNTLI 813
+L +M ++ +PN T+N L+ FC+ A +V EM + ++ T + +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 814 SGFCQAGKTEM 846
+G GK ++
Sbjct: 491 NGLKHQGKDQL 501