BLASTX nr result

ID: Atractylodes22_contig00030511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030511
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [V...   115   5e-24
gb|ABK22002.1| unknown [Picea sitchensis]                             112   3e-23
emb|CAC84677.1| putative histone H2A [Pinus pinaster]                 111   6e-23
ref|XP_001777344.1| histone H2A variant [Physcomitrella patens s...   109   2e-22
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   109   3e-22

>ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|147787162|emb|CAN64650.1| hypothetical protein
           VITISV_002812 [Vitis vinifera]
           gi|297743375|emb|CBI36242.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  115 bits (287), Expect = 5e-24
 Identities = 74/115 (64%), Positives = 75/115 (65%)
 Frame = +2

Query: 182 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXXAGLQFPVGXXXXXXXXXXXXXX 361
           MSGKGAKGLIMGK  SS LNG                 AGLQFPVG              
Sbjct: 1   MSGKGAKGLIMGK--SSTLNGNKDKDKKKPISRSSR--AGLQFPVG-------------- 42

Query: 362 XXXXXXRVHRLLKTRVSASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 526
                 RVHRLLKTRVSA+GRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK
Sbjct: 43  ------RVHRLLKTRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 91


>gb|ABK22002.1| unknown [Picea sitchensis]
          Length = 145

 Score =  112 bits (281), Expect = 3e-23
 Identities = 68/118 (57%), Positives = 76/118 (64%)
 Frame = +2

Query: 173 GVKMSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXXAGLQFPVGXXXXXXXXXXX 352
           G  MSGKGAKGL+MGK SS+ +N                  AGLQFPVG           
Sbjct: 4   GGNMSGKGAKGLLMGK-SSAPVNNNNSKDKDKKKPVSRSSRAGLQFPVG----------- 51

Query: 353 XXXXXXXXXRVHRLLKTRVSASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 526
                    R+HRLLK+R+SA+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 52  ---------RIHRLLKSRISANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 100


>emb|CAC84677.1| putative histone H2A [Pinus pinaster]
          Length = 139

 Score =  111 bits (278), Expect = 6e-23
 Identities = 67/115 (58%), Positives = 75/115 (65%)
 Frame = +2

Query: 182 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXXAGLQFPVGXXXXXXXXXXXXXX 361
           MSGKGAKGL+MGK SS+ +N                  AGLQFPVG              
Sbjct: 1   MSGKGAKGLLMGK-SSAPVNNNNNKDKDKKKPVSRSSRAGLQFPVG-------------- 45

Query: 362 XXXXXXRVHRLLKTRVSASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 526
                 R+HRLLK+R+SA+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 46  ------RIHRLLKSRISANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 94


>ref|XP_001777344.1| histone H2A variant [Physcomitrella patens subsp. patens]
           gi|162671320|gb|EDQ57874.1| histone H2A variant
           [Physcomitrella patens subsp. patens]
          Length = 143

 Score =  109 bits (273), Expect = 2e-22
 Identities = 67/118 (56%), Positives = 76/118 (64%)
 Frame = +2

Query: 173 GVKMSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXXAGLQFPVGXXXXXXXXXXX 352
           G   SGKGAKGL+MGKA++SA+                   AGLQFPVG           
Sbjct: 2   GGNQSGKGAKGLLMGKAAASAV--VDDKSKDKKKPTSRSSRAGLQFPVG----------- 48

Query: 353 XXXXXXXXXRVHRLLKTRVSASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 526
                    R+HRLLK+RV+A+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 49  ---------RIHRLLKSRVAANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 97


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  109 bits (272), Expect = 3e-22
 Identities = 68/115 (59%), Positives = 74/115 (64%)
 Frame = +2

Query: 182 MSGKGAKGLIMGKASSSALNGXXXXXXXXXXXXXXXXXAGLQFPVGXXXXXXXXXXXXXX 361
           MSGKGAKGLI GK S+SA +                  AGLQFPVG              
Sbjct: 1   MSGKGAKGLITGKTSASAKD----KDKDKKKPVSRSSRAGLQFPVG-------------- 42

Query: 362 XXXXXXRVHRLLKTRVSASGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVK 526
                 R+HRLLK+RVSA+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVK
Sbjct: 43  ------RIHRLLKSRVSANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVK 91


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