BLASTX nr result

ID: Atractylodes22_contig00030447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030447
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    57   1e-06

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -2

Query: 382  IIPRKVNILIWRIHKKGIPVREKIHERGIDLDSRLRPRCTNDQESLHHCFLQCPYSALVW 203
            IIP K+  ++WR   K +P R ++  RG+D+D    PRC  ++E+++H    CPY+A +W
Sbjct: 1367 IIP-KIKYMLWRTISKALPTRSRLLTRGMDIDPHC-PRCPTEEETINHVLFTCPYAASIW 1424

Query: 202  KVI-FAW 185
             +  F W
Sbjct: 1425 GLSNFPW 1431


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