BLASTX nr result

ID: Atractylodes22_contig00030321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030321
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   318   1e-84
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   314   1e-83
ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...   305   9e-81
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   290   2e-76
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   286   3e-75

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  318 bits (815), Expect = 1e-84
 Identities = 155/203 (76%), Positives = 176/203 (86%)
 Frame = +2

Query: 2   LDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNR 181
           LDKGTSGLLVVAKDEHSHAHLS+QFK H+I R+Y+SLT GVP+P SGRV+IP+GRD  NR
Sbjct: 228 LDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNR 287

Query: 182 IRMIADTGPTKCGKSRHAASRYRVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLM 361
           IRM A  GP+  G++RHAASRY+V+EILA GGSALVEWRLETGRTHQIRAHAKYLGIPL+
Sbjct: 288 IRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLL 347

Query: 362 GDEVYGGTKNMALSRLQLKNPSSLHGQLSQLVSKLDRPCLHALTLGFTHPCTRERMQFSC 541
           GDEVYGGTKNMALS L+ + PSS HGQL+QLVS+LDRPCLHA+ LGF HP T + + FSC
Sbjct: 348 GDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSC 407

Query: 542 LPPVDFAEILTGLRNISTEKTKG 610
            PP DFAEIL+ LR ISTEK KG
Sbjct: 408 QPPEDFAEILSWLRKISTEKKKG 430


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  314 bits (805), Expect = 1e-83
 Identities = 153/200 (76%), Positives = 174/200 (87%)
 Frame = +2

Query: 2   LDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNR 181
           LDKGTSGLLVVAKDEHSHAHLS+QFK H+I R+Y+SLT GVP+P SGRV+IP+GRD  NR
Sbjct: 374 LDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNR 433

Query: 182 IRMIADTGPTKCGKSRHAASRYRVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLM 361
           IRM A  GP+  G++RHAASRY+V+EILA GGSALVEWRLETGRTHQIRAHAKYLGIPL+
Sbjct: 434 IRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLL 493

Query: 362 GDEVYGGTKNMALSRLQLKNPSSLHGQLSQLVSKLDRPCLHALTLGFTHPCTRERMQFSC 541
           GDEVYGGTKNMALS L+ + PSS HGQL+QLVS+LDRPCLHA+ LGF HP T + + FSC
Sbjct: 494 GDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSC 553

Query: 542 LPPVDFAEILTGLRNISTEK 601
            PP DFAEIL+ LR ISTEK
Sbjct: 554 QPPEDFAEILSWLRKISTEK 573


>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  305 bits (781), Expect = 9e-81
 Identities = 147/200 (73%), Positives = 172/200 (86%)
 Frame = +2

Query: 2   LDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNR 181
           LDKGTSGLLVVAKDEHSHAHLS+QFK HTI+R+YVSLTCGVP+P +GR+D+PIGRD++NR
Sbjct: 241 LDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNR 300

Query: 182 IRMIADTGPTKCGKSRHAASRYRVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLM 361
           IRM A   P + G++RHAASRY+V+EILAGGGSALVEWRLETGRTHQIRAHAKY+GIPL+
Sbjct: 301 IRMAAIVEPNR-GQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLL 359

Query: 362 GDEVYGGTKNMALSRLQLKNPSSLHGQLSQLVSKLDRPCLHALTLGFTHPCTRERMQFSC 541
           GDEVYGGT+NMALS L+ +   S H QLS  +S L+RPCLHAL LGFTHPCT + + FSC
Sbjct: 360 GDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSC 419

Query: 542 LPPVDFAEILTGLRNISTEK 601
            PP DF EIL+ LR + TEK
Sbjct: 420 PPPPDFTEILSQLREMGTEK 439


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  290 bits (743), Expect = 2e-76
 Identities = 138/199 (69%), Positives = 167/199 (83%)
 Frame = +2

Query: 2   LDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNR 181
           LDKGTSGLLVVAKDEHSH  LS+QFKQ TI+R+YVSLT GVP+P +GRV++P+GRD  NR
Sbjct: 242 LDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNR 301

Query: 182 IRMIADTGPTKCGKSRHAASRYRVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLM 361
           IRM A TGP    K+R+AASRY+V+EILAGG  +LVEW+LETGRTHQIRAHAKYLG+PL+
Sbjct: 302 IRMTAVTGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLL 361

Query: 362 GDEVYGGTKNMALSRLQLKNPSSLHGQLSQLVSKLDRPCLHALTLGFTHPCTRERMQFSC 541
           GDE+YGGTK+M LS L+ + P SLH ++ ++VS+LDRPCLHA TLGF HP T E++ FSC
Sbjct: 362 GDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSC 421

Query: 542 LPPVDFAEILTGLRNISTE 598
            PP DFAEIL+ LR I +E
Sbjct: 422 EPPADFAEILSQLRRIGSE 440


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  286 bits (733), Expect = 3e-75
 Identities = 139/200 (69%), Positives = 165/200 (82%)
 Frame = +2

Query: 2   LDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNR 181
           LDKGTSGLLVVAKDEHSHAHLS QFKQH+I+R+Y+SLTCGVP   +GR+++PI RD  NR
Sbjct: 227 LDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNR 286

Query: 182 IRMIADTGPTKCGKSRHAASRYRVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLM 361
           IRM A  G      +++AASRY V+EILA GGS+LVEWRLETGRTHQIRAHAKY+GIPL+
Sbjct: 287 IRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLL 346

Query: 362 GDEVYGGTKNMALSRLQLKNPSSLHGQLSQLVSKLDRPCLHALTLGFTHPCTRERMQFSC 541
           GDEVYGGTK+MA+S L+ +  S+ HGQL QLVS L+RPCLHALTLGF HP T + ++FSC
Sbjct: 347 GDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSC 406

Query: 542 LPPVDFAEILTGLRNISTEK 601
            PP DF EIL+ LR I T+K
Sbjct: 407 PPPTDFTEILSQLREIGTQK 426


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