BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030226
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...    84   9e-15
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    81   1e-13
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    81   1e-13
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-...    76   3e-12
emb|CAD20832.1| sigma factor [Spinacia oleracea]                       74   2e-11

>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/69 (56%), Positives = 57/69 (82%)
 Frame = +3

Query: 6   KQCMMNEIYNRMKDLDARERKVLVLRFGLKGYQRKTLEEIGRSFGVSKEWIRRIERRALT 185
           +Q M+ +++N ++ LD+RER+VL+LRFGL  YQ K+LEEIGR F VSKEW+RR+E+R +T
Sbjct: 484 RQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMT 543

Query: 186 KLKVDDEET 212
           +L+  +EET
Sbjct: 544 RLR--NEET 550


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/71 (56%), Positives = 52/71 (73%)
 Frame = +3

Query: 6   KQCMMNEIYNRMKDLDARERKVLVLRFGLKGYQRKTLEEIGRSFGVSKEWIRRIERRALT 185
           +QC   +I+N +K LD RER++LVLR+G    QRK+LEEIGR F VSKEWIR++E+ AL 
Sbjct: 485 QQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALA 544

Query: 186 KLKVDDEETLQ 218
            L+  DEE  Q
Sbjct: 545 NLR--DEEICQ 553


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/71 (56%), Positives = 52/71 (73%)
 Frame = +3

Query: 6   KQCMMNEIYNRMKDLDARERKVLVLRFGLKGYQRKTLEEIGRSFGVSKEWIRRIERRALT 185
           +QC   +I+N +K LD RER++LVLR+G    QRK+LEEIGR F VSKEWIR++E+ AL 
Sbjct: 535 QQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALA 594

Query: 186 KLKVDDEETLQ 218
            L+  DEE  Q
Sbjct: 595 NLR--DEEICQ 603


>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
           gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
           polymerase sigma factor sigC-like [Cucumis sativus]
          Length = 559

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/71 (49%), Positives = 58/71 (81%)
 Frame = +3

Query: 6   KQCMMNEIYNRMKDLDARERKVLVLRFGLKGYQRKTLEEIGRSFGVSKEWIRRIERRALT 185
           ++ M  +I+N ++ L++RER+VLVLR+GL  ++ K+LEEIG+   +SKEW+R+IE++A+T
Sbjct: 484 RKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEKKAMT 543

Query: 186 KLKVDDEETLQ 218
           KLK  +EET++
Sbjct: 544 KLK--NEETVK 552


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/69 (47%), Positives = 54/69 (78%)
 Frame = +3

Query: 6   KQCMMNEIYNRMKDLDARERKVLVLRFGLKGYQRKTLEEIGRSFGVSKEWIRRIERRALT 185
           KQ M N+++  +++LD +ER+VL+ R+GL+G+   +L E+G+ F VSKEWIR++E+RALT
Sbjct: 473 KQHMRNDVHKLLQELDPKERRVLIHRYGLEGHCM-SLHEVGKVFDVSKEWIRKMEKRALT 531

Query: 186 KLKVDDEET 212
           KL+ +  +T
Sbjct: 532 KLRTEQNQT 540