BLASTX nr result

ID: Atractylodes22_contig00030194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030194
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34365.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   122   4e-26
ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   119   2e-25
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...   113   2e-23

>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +2

Query: 47  DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 226
           DS D  NPGNNLYVTG+STRV+ SDLE +FN EGKV ECHLVTDPRT+ SRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 227 TADADRCVQYLN 262
             DADRC++YLN
Sbjct: 105 VEDADRCIKYLN 116


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +2

Query: 47  DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 226
           DS D  NPGNNLYVTG+STRV+ SDLE +FN EGKV ECHLVTDPRT+ SRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 227 TADADRCVQYLN 262
             DADRC++YLN
Sbjct: 105 VEDADRCIKYLN 116


>ref|XP_002304510.1| predicted protein [Populus trichocarpa] gi|222841942|gb|EEE79489.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = +2

Query: 47  DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 226
           DS D SNPGNNLYVTG+STRV +SDLE +F+ EGKV ECHLVTDPRT+ SRGFAFVTMET
Sbjct: 39  DSGDASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMET 98

Query: 227 TADADRCVQYLN 262
             DA+RCV+YLN
Sbjct: 99  VEDANRCVKYLN 110


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +2

Query: 50  SADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMETT 229
           S D +NPGNNLYVTG+STRV T DLE +F KEGKV ECHLVTDPRT+ SRGFAFVTMET 
Sbjct: 39  SVDAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETL 98

Query: 230 ADADRCVQYLN 262
            DA+RCV+YLN
Sbjct: 99  EDAERCVKYLN 109


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Glycine max]
          Length = 191

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +2

Query: 47  DSADVSNPGNNLYVTGISTRVDTSDLENFFNKEGKVTECHLVTDPRTKVSRGFAFVTMET 226
           DSADV NPGNNLYVTG+STR+  SDL  +F+KEGKV +CHLV DP TK SRGF FVTMET
Sbjct: 37  DSADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMET 96

Query: 227 TADADRCVQYLN 262
             DA+ C++YLN
Sbjct: 97  NDDAECCIKYLN 108


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