BLASTX nr result

ID: Atractylodes22_contig00030132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030132
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    74   9e-12
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    73   2e-11
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    73   3e-11
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    72   4e-11

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = -3

Query: 238 EIHWAAKKVKLPEFFGYDHRGWISKAEIYFEIHGTPH-LRTRLAQLCMSGVAQHWFSVVK 62
           E   A KKVKLP F G D   WI++AEIYF++  T   +R +LA+L M G   HWF+++ 
Sbjct: 66  ESRLAGKKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLM 125

Query: 61  EIYDDLGWEDLTREMLQRF 5
           E  D+L WE+L R ++ R+
Sbjct: 126 ETEDELSWENLKRALIARY 144


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = -3

Query: 253 QKSGDEIHWAAKKVKLPEFFGYDHRGWISKAEIYFEIHGTPH-LRTRLAQLCMSGVAQHW 77
           + S +E   + KKVKLP F G D   WI++ EIYF++  T   +R +LA+L M G   HW
Sbjct: 44  ESSQEESRLSGKKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHW 103

Query: 76  FSVVKEIYDDLGWEDLTREMLQRF 5
           F+++ E  D+L WE L R ++ R+
Sbjct: 104 FNLLMETEDELSWEKLKRALIARY 127


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = -3

Query: 253 QKSGDEIHWAAKKVKLPEFFGYDHRGWISKAEIYFEIHGTP-HLRTRLAQLCMSGVAQHW 77
           + S +E   A KKVKLP F G D   WI++AEIYF++  TP  +R +L++L M G   HW
Sbjct: 734 ESSQNESRLAGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHW 793

Query: 76  FSVVKEIYDDLGWEDLTREMLQRF 5
           F+++ E  DDL  E L + ++ R+
Sbjct: 794 FNLLMETEDDLSREKLKKALIARY 817


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 268 HTPLEQKSGDEIHWAAKKVKLPEFFGYDHRGWISKAEIYFEIHGT-PHLRTRLAQLCMSG 92
           ++ L  ++ DE   + KKV+L  F G D  GWI++AE+YF +  T P ++  LAQLCM G
Sbjct: 66  NSELHDEALDEFRLSVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDG 125

Query: 91  VAQHWFSVVKEIYDDLGWEDLTREMLQRF 5
              H+F  + E  + L WEDL   +L+R+
Sbjct: 126 PTIHFFKGLLEENETLTWEDLKDALLERY 154


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