BLASTX nr result

ID: Atractylodes22_contig00030122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00030122
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis...   129   3e-28
ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyr...   128   4e-28
ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana] ...   128   4e-28
ref|NP_001241959.1| uncharacterized protein LOC100797461 [Glycin...   127   1e-27
ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [...   126   2e-27

>ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
           gi|296087576|emb|CBI34832.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/62 (96%), Positives = 61/62 (98%)
 Frame = +3

Query: 75  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPVKLQIW 254
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 255 DT 260
           DT
Sbjct: 61  DT 62


>ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 211

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +3

Query: 75  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPVKLQIW 254
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV +DGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 255 DT 260
           DT
Sbjct: 61  DT 62


>ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName:
           Full=Ras-related protein RABB1b; Short=AtRABB1b;
           AltName: Full=Ras-related protein GB2; Short=AtGB2;
           AltName: Full=Ras-related protein Rab2C; Short=AtRab2C
           gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
           gi|3805852|emb|CAA21472.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|7270538|emb|CAB81495.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|17529056|gb|AAL38738.1| putative GTP-binding protein
           GB2 [Arabidopsis thaliana] gi|21436445|gb|AAM51423.1|
           putative GTP-binding protein GB2 [Arabidopsis thaliana]
           gi|21553875|gb|AAM62968.1| GTP-binding protein GB2
           [Arabidopsis thaliana] gi|332661181|gb|AEE86581.1|
           GTP-binding protein GB2 [Arabidopsis thaliana]
          Length = 211

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +3

Query: 75  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPVKLQIW 254
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV +DGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 255 DT 260
           DT
Sbjct: 61  DT 62


>ref|NP_001241959.1| uncharacterized protein LOC100797461 [Glycine max]
           gi|255639407|gb|ACU19999.1| unknown [Glycine max]
          Length = 211

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/62 (95%), Positives = 61/62 (98%)
 Frame = +3

Query: 75  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPVKLQIW 254
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV+ID RP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDSRPIKLQIW 60

Query: 255 DT 260
           DT
Sbjct: 61  DT 62


>ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
           gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related
           protein RABB1b-like [Cucumis sativus]
          Length = 211

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = +3

Query: 75  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPVKLQIW 254
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV ID RP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60

Query: 255 DT 260
           DT
Sbjct: 61  DT 62


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