BLASTX nr result

ID: Atractylodes22_contig00029667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00029667
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   148   5e-34
gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| T...   111   7e-23
ref|NP_001147978.1| DNA replication licensing factor mcm4 [Zea m...   111   7e-23
ref|XP_003569170.1| PREDICTED: DNA replication licensing factor ...   110   2e-22

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/126 (65%), Positives = 94/126 (74%), Gaps = 13/126 (10%)
 Frame = +3

Query: 3   YETPPPPSHSRFAATPDATPTPNSTAP*S-----RRGGRTA-------TPS-TDDVPPSS 143
           + TPP P HSRFAA+ + TPTP+   P       RRG R A       TPS TD+ PPSS
Sbjct: 50  FATPPHP-HSRFAAS-ETTPTPSEATPTPSSGRRRRGSRRASVSTPIATPSSTDEAPPSS 107

Query: 144 EGGDPDETDEAPPMFVWGTSISVQDVNAAILRFLRHFREHPSHDEGKYMKAIHHVIEIEE 323
           EG + D+ DEAPPMFVWGT+ISVQDVNAAILRFLRHFREHPSH EGKYM+AIH V+EIE 
Sbjct: 108 EG-EGDDMDEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEG 166

Query: 324 ESLEVD 341
           ESL+VD
Sbjct: 167 ESLDVD 172


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  148 bits (373), Expect = 5e-34
 Identities = 83/126 (65%), Positives = 94/126 (74%), Gaps = 13/126 (10%)
 Frame = +3

Query: 3   YETPPPPSHSRFAATPDATPTPNSTAP*S-----RRGGRTA-------TPS-TDDVPPSS 143
           + TPP P HSRFAA+ + TPTP+   P       RRG R A       TPS TD+ PPSS
Sbjct: 50  FATPPHP-HSRFAAS-ETTPTPSEATPTPSSGRRRRGSRRASVSTPIATPSSTDEAPPSS 107

Query: 144 EGGDPDETDEAPPMFVWGTSISVQDVNAAILRFLRHFREHPSHDEGKYMKAIHHVIEIEE 323
           EG + D+ DEAPPMFVWGT+ISVQDVNAAILRFLRHFREHPSH EGKYM+AIH V+EIE 
Sbjct: 108 EG-EGDDMDEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEG 166

Query: 324 ESLEVD 341
           ESL+VD
Sbjct: 167 ESLDVD 172


>gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| TPA: DNA
           replication licensing factor mcm4 [Zea mays]
          Length = 850

 Score =  111 bits (277), Expect = 7e-23
 Identities = 72/130 (55%), Positives = 83/130 (63%), Gaps = 17/130 (13%)
 Frame = +3

Query: 3   YETPPPPSH---SRFAATPDATPTPNSTAP*SRRGGRTATP-STDDVPPSSEGGDPDETD 170
           +ETPP P     S   A     P  NST    R     +TP STDDVPPSSE GD DETD
Sbjct: 59  FETPPHPGRRTPSGAGAGAPRQPRQNSTG---RFPPTPSTPMSTDDVPPSSEAGD-DETD 114

Query: 171 -----EAPPMFVWGTSISVQDVNAAILRFLRHFRE-------HPSHDEGKYMKAIHHVIE 314
                +A P+FVWGT+ISVQDVNAAILRFLRHFR+        P  DEGKYM+AIH ++E
Sbjct: 115 GGGGVDATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILE 174

Query: 315 IE-EESLEVD 341
           +E  ESL+VD
Sbjct: 175 LEGGESLDVD 184


>ref|NP_001147978.1| DNA replication licensing factor mcm4 [Zea mays]
           gi|195614962|gb|ACG29311.1| DNA replication licensing
           factor mcm4 [Zea mays]
          Length = 850

 Score =  111 bits (277), Expect = 7e-23
 Identities = 72/130 (55%), Positives = 83/130 (63%), Gaps = 17/130 (13%)
 Frame = +3

Query: 3   YETPPPPSH---SRFAATPDATPTPNSTAP*SRRGGRTATP-STDDVPPSSEGGDPDETD 170
           +ETPP P     S   A     P  NST    R     +TP STDDVPPSSE GD DETD
Sbjct: 59  FETPPHPGRRTPSGAGAGAPRQPRQNSTG---RFPPTPSTPMSTDDVPPSSEAGD-DETD 114

Query: 171 -----EAPPMFVWGTSISVQDVNAAILRFLRHFRE-------HPSHDEGKYMKAIHHVIE 314
                +A P+FVWGT+ISVQDVNAAILRFLRHFR+        P  DEGKYM+AIH ++E
Sbjct: 115 GGGGVDATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILE 174

Query: 315 IE-EESLEVD 341
           +E  ESL+VD
Sbjct: 175 LEGGESLDVD 184


>ref|XP_003569170.1| PREDICTED: DNA replication licensing factor mcm4-like [Brachypodium
           distachyon]
          Length = 855

 Score =  110 bits (274), Expect = 2e-22
 Identities = 71/137 (51%), Positives = 84/137 (61%), Gaps = 24/137 (17%)
 Frame = +3

Query: 3   YETPPPPSHSRFAATPDATPTPNSTAP*SRRGGRT-------ATP-STDDVPPSSEGGDP 158
           +ETPPPP  S          TP+   P  +R   T       +TP STDDVP SSE GD 
Sbjct: 63  FETPPPPGRS----------TPSGAGPTRQRQNWTGRFPPTPSTPMSTDDVPMSSEAGDE 112

Query: 159 D--ETD------EAPPMFVWGTSISVQDVNAAILRFLRHFRE-------HPSHDEGKYMK 293
           D  ETD      +A P+FVWGT+ISVQDVNAAILRFLRHFR+        P  DEGKYM+
Sbjct: 113 DTPETDGGGAGVDATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMR 172

Query: 294 AIHHVIEIE-EESLEVD 341
           AIH ++E+E  ESL+VD
Sbjct: 173 AIHRILELEGGESLDVD 189


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