BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028076
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]         77   3e-18
ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata...    81   8e-14
ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatul...    78   8e-13
ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thalian...    78   8e-13
ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
          Length = 143

 Score = 77.0 bits (188), Expect(2) = 3e-18
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -3

Query: 246 QGVLGIKVKIMLAWDPTGKLGPKTPLPDNVVIHMPK 139
           QGVLGIKVKIML WDPTGKLGPKTPLPDNVVIHMPK
Sbjct: 36  QGVLGIKVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71



 Score = 39.3 bits (90), Expect(2) = 3e-18
 Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
 Frame = -1

Query: 143 PRTMLLLSHQKRWRNIDHHS*LPMSLFRCL--FLFKLQ*E 30
           P+ MLL    KR RNIDHH  LPMSL +CL  +LFK+Q E
Sbjct: 70  PKMMLLHFLLKRLRNIDHHL-LPMSLCQCLCRYLFKVQLE 108


>ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/61 (62%), Positives = 46/61 (75%)
 Frame = -3

Query: 246 QGVLGIKVKIMLAWDPTGKLGPKTPLPDNVVIHMPKDDVIALPPKEVEEYRPPLVIADEP 67
           QGVLGIKVKIML WDPTGK GPKTPLPD V+IH PKDDV+ L P ++    P  ++ + P
Sbjct: 179 QGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVNLAPAQIA--APVTLVPEAP 236

Query: 66  I 64
           +
Sbjct: 237 L 237


>ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|357498233|ref|XP_003619405.1| 40S ribosomal protein
           S3 [Medicago truncatula] gi|355494418|gb|AES75621.1| 40S
           ribosomal protein S3 [Medicago truncatula]
           gi|355494420|gb|AES75623.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 235

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 246 QGVLGIKVKIMLAWDPTGKLGPKTPLPDNVVIHMPKDDVIALPPKEVEEY-RPPLVIADE 70
           QGVLGIKVKIML WDP GK GPKTPLPD V IH PKD+         EEY RP  V+A  
Sbjct: 179 QGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKDE---------EEYTRPAAVVAPL 229

Query: 69  PIPMSV 52
           P+P++V
Sbjct: 230 PVPIAV 235


>ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
           gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S
           ribosomal protein S3-1
           gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13
           [Arabidopsis thaliana] gi|4582468|gb|AAD24852.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|15028253|gb|AAK76715.1|
           putative 40S ribosomal protein; contains C-terminal
           domain [Arabidopsis thaliana] gi|15450571|gb|AAK96463.1|
           At2g31610/T9H9.13 [Arabidopsis thaliana]
           gi|15451084|gb|AAK96813.1| 40S ribosomal protein
           [Arabidopsis thaliana] gi|20148377|gb|AAM10079.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|20258907|gb|AAM14147.1|
           putative 40S ribosomal protein [Arabidopsis thaliana]
           gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1
           [Arabidopsis thaliana]
          Length = 250

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/61 (60%), Positives = 44/61 (72%)
 Frame = -3

Query: 246 QGVLGIKVKIMLAWDPTGKLGPKTPLPDNVVIHMPKDDVIALPPKEVEEYRPPLVIADEP 67
           QGVLGIKVKIML WDPTGK GPKTPLPD V+IH PKDDV+   P +     P  ++ + P
Sbjct: 179 QGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAA--APVTLVQEAP 236

Query: 66  I 64
           +
Sbjct: 237 L 237


>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/64 (60%), Positives = 44/64 (68%)
 Frame = -3

Query: 246 QGVLGIKVKIMLAWDPTGKLGPKTPLPDNVVIHMPKDDVIALPPKEVEEYRPPLVIADEP 67
           QGVLGIKVKIML WDP GK+GP TPLPD V IH         PPKE EEY PPL+  +  
Sbjct: 179 QGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIH---------PPKEEEEYVPPLLTTNIE 229

Query: 66  IPMS 55
           IP++
Sbjct: 230 IPVA 233