BLASTX nr result
ID: Atractylodes22_contig00028033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00028033
(1274 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2... 341 2e-91
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 340 5e-91
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 298 3e-78
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 258 2e-66
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 255 2e-65
>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
predicted protein [Populus trichocarpa]
Length = 564
Score = 341 bits (875), Expect = 2e-91
Identities = 179/421 (42%), Positives = 272/421 (64%), Gaps = 5/421 (1%)
Frame = -2
Query: 1252 SLSKNTTKTTQNWRTQIKHTHLISQISTILLQRHNWPSLLQTLNLKSKLTPSLFLQILTT 1073
SL++ T+ WR QI+ L+ QIS+ILLQRHNW SLLQ NL +KLTP LF QIL
Sbjct: 2 SLNRANPTTSMKWRIQIRQNQLVFQISSILLQRHNWVSLLQNFNLSTKLTPPLFNQILHK 61
Query: 1072 TKSQPQISLDFFKWAIKNTSFQPDLSVQCRMTHLLIGSGLVHPSKPILNSLLQNNPPAQI 893
T++ PQISL FF W N +PDL QC + ++ + SGL P +PI++SL++ + + +
Sbjct: 62 TQTNPQISLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVL 121
Query: 892 VQSLFKSCEKDAIFHSSKASVVFNCVLSWYCEKGFCFQALEVFNLTRDLINSDGSELFSV 713
+++ SC ++ S F+ VL Y KG ++LE+F R G+ +
Sbjct: 122 GEAMVDSCRGKSL-----KSDAFSFVLECYSHKGLFMESLEMFRKMR------GNGFIAS 170
Query: 712 GSY-NTVLNSLQENNEVKLGLCFYGGMIRRGVLIDQFTWRIVARIFSKEGRVDAILRIID 536
G+ N+VL+ LQ NE+KL CFY MI+ GVL D+ TW ++A+I K+G + I++ +D
Sbjct: 171 GTACNSVLDVLQRENEIKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLD 230
Query: 535 MGVHDSLIYDLLIECCSEIGMFELALHMFDEMSKRKLNPGFNTFASVLNGACRYQNHEMI 356
MGV++S++Y+ +I+CCS+ G FE A ++M +RKL+PGF+T++++L+GAC++ N E+I
Sbjct: 231 MGVYNSVLYNGVIDCCSKRGDFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVI 290
Query: 355 KFAMESMAEKGYISK-PLTKHDSLIQKLCSMRKTYAANMLSKTACN---SLENETYGCML 188
+ M+ MAEKG + K PL++ DS+IQK + K A M + AC+ L++ TYGCML
Sbjct: 291 ERVMDIMAEKGLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYGCML 350
Query: 187 QALSMEARVKDAIETYRVIEHRGVQVNPIFYHEFLNVLCNQDPSKELNTLLIDMISRGYK 8
+ALS EARVK+AI Y +I +G++V YH FL++L +D +E +L DM+ RG++
Sbjct: 351 KALSKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRRGFR 410
Query: 7 P 5
P
Sbjct: 411 P 411
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
[Vitis vinifera]
Length = 569
Score = 340 bits (872), Expect = 5e-91
Identities = 197/429 (45%), Positives = 268/429 (62%), Gaps = 6/429 (1%)
Frame = -2
Query: 1273 KINLLIRSLSKNTTKTTQNWRTQIKHTHLISQISTILLQRHNWPSLLQTLNLKSKLTPSL 1094
K N SK+TT NWR QIK LISQIS+ILLQRHNW +LL+ NL SKLTPSL
Sbjct: 5 KPNTSFNQFSKSTTPL--NWRAQIKQNQLISQISSILLQRHNWVTLLRNFNLSSKLTPSL 62
Query: 1093 FLQILTTTKSQPQISLDFFKWAIKNTSFQPDLSVQCRMTHLLIGSGLVHPSKPILNSLLQ 914
F QIL T+ PQ SL FF W N FQPDL+ ++ + I SGL P+K IL+SL++
Sbjct: 63 FHQILLKTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIE 122
Query: 913 NNPPAQIVQSLFKSCE-KDAIFHSSKASVVFNCVLSWYCEKGFCFQALEVFNLTRDLINS 737
+ +V S+ ++C KD+ S V VL Y KG +ALEVF R I+
Sbjct: 123 TQKVSVLVDSVIQACRGKDS------ESPVLGFVLECYSSKGLFIEALEVFR--RITIH- 173
Query: 736 DGSELFSVGSYNTVLNSLQENNEVKLGLCFYGGMIRRGVLIDQFTWRIVARIFSKEGRVD 557
+ SV S N +L+SLQ NE+KL C G +IR GVL D +A I K G+++
Sbjct: 174 --GYVPSVRSCNALLDSLQRENEIKLAWCVCGALIRNGVLPDYVR---IALILCKNGKLE 228
Query: 556 AILRIIDMG-VHDSLIYDLLIECCSEIGMFELALHMFDEMSKRKLNPGFNTFASVLNGAC 380
++R++DM V ++LIY L+I+C E G F A H +EM RK +PGF + S+L+GAC
Sbjct: 229 RVVRLLDMSIVCNALIYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGAC 288
Query: 379 RYQNHEMIKFAMESMAEKGYISK-PLTKHDSLIQKLCSMRKTYAANMLSKTACN---SLE 212
+Y+N E+I+ M SM EKG + K L+++DS+IQK+C++ KT+AA M K A N L+
Sbjct: 289 KYENDEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELD 348
Query: 211 NETYGCMLQALSMEARVKDAIETYRVIEHRGVQVNPIFYHEFLNVLCNQDPSKELNTLLI 32
N TYGCML+AL+ + RVK+AI Y VI GV V YH F+NVLC +DPS+E++ L+
Sbjct: 349 NATYGCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMG 408
Query: 31 DMISRGYKP 5
++I +G+ P
Sbjct: 409 EIIGKGFSP 417
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 298 bits (762), Expect = 3e-78
Identities = 165/427 (38%), Positives = 263/427 (61%), Gaps = 4/427 (0%)
Frame = -2
Query: 1273 KINLLIRSLSKNTTKTTQNWRTQIKHTHLISQISTILLQRHNWPSLLQTLNLKSKLTPSL 1094
+ +L+ + +T+ + +WRT+I+ L+S+ISTILLQR+NW LLQ LNL SKLTP L
Sbjct: 24 RAQMLLFRKTYSTSTSKISWRTRIQQNQLVSEISTILLQRNNWIPLLQNLNLSSKLTPFL 83
Query: 1093 FLQILTTTKSQPQISLDFFKWAIKNTSFQPDLSVQCRMTHLLIGSGLVHPSKPILNSLLQ 914
F QIL T++ QISL+FF WA N +F PDL QC + L +GS L +K IL+SL++
Sbjct: 84 FFQILHKTQTHAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIK 143
Query: 913 NNPPAQIVQSLFKSCEKDAIFHSSKASVVFNCVLSWYCEKGFCFQALEVFNLTRDLINSD 734
P ++++ ++C S N VL +Y KG + LEV+ R + +
Sbjct: 144 TYPSNLFLETMVQACR-----GKSSLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTP 198
Query: 733 GSELFSVGSYNTVLNSLQENNEVKLGLCFYGGMIRRGVLIDQFTWRIVARIFSKEGRVDA 554
SV + N +L++LQ +E++L CFY MIR GVL D+FTW +VA I K+G +
Sbjct: 199 -----SVHACNVLLDALQRESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFER 253
Query: 553 ILRIIDMGVHDSLIYDLLIECCSEIGMFELALHMFDEMSKRKLNPGFNTFASVLNGACRY 374
I++++DMG+ +S++Y+ +++ S+ G F+ A +EM RK+ PGF+T++S+L+GAC+
Sbjct: 254 IVKLLDMGICNSVMYNAVVDYYSKNGDFKAAFCRLNEMYDRKVEPGFSTYSSILDGACKC 313
Query: 373 QNHEMIKFAMESMAEKGYISK-PLTKHDSLIQKLCSMRKTYAANMLSKTACN---SLENE 206
+N ++I+ + M K +SK P + +DS+IQKLC + K AA + K AC+ L++
Sbjct: 314 RNLQVIERVVAIMVGKQLLSKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDERIGLQDA 373
Query: 205 TYGCMLQALSMEARVKDAIETYRVIEHRGVQVNPIFYHEFLNVLCNQDPSKELNTLLIDM 26
TYG ML+A S+E +++AI Y+VI RG+ + F+++L +D E ++ D+
Sbjct: 374 TYGRMLRAFSIEGILEEAIGLYQVILERGLTIKDNASDAFVDLLSEKDQYAEGYEIVRDI 433
Query: 25 ISRGYKP 5
+ RG+ P
Sbjct: 434 MRRGFSP 440
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 258 bits (659), Expect = 2e-66
Identities = 151/421 (35%), Positives = 238/421 (56%), Gaps = 10/421 (2%)
Frame = -2
Query: 1237 TTKTTQNWRTQIKHTHLISQISTILLQRHNWPSLLQTLNLK---SKLTPSLFLQILTTTK 1067
+T + +W+TQ + ++IS+ILLQR NW + LQ + K S LT +FLQIL T+
Sbjct: 21 STSSASDWKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPVFLQILRETR 80
Query: 1066 SQPQISLDFFKWAIKNTSFQPDLSVQCRMTHLLIGSGLVHPSKPILNSLLQNNPPAQIVQ 887
P+ +LDFF +A + F+PDL CR+ + SGL+ ++ +L L++ N + +V
Sbjct: 81 KCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVG 140
Query: 886 SLFKSCEKDAIFHSSKASVVFNCVLSWYCEKGFCFQALEVFNLTRDLINSDGSELFSVGS 707
+ + E + SV + VL +Y KG LEVF R L S S +
Sbjct: 141 EMHRWFEGEV-----SLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSP-----SQSA 190
Query: 706 YNTVLNSLQENNEVKLGLCFYGGMIRRGVLIDQFTWRIVARIFSKEGRVDAILRIIDMGV 527
YN++L SL + N+ ++ LC Y M+R G++ D+ TW ++A+I ++GR ++ ++++ GV
Sbjct: 191 YNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGV 250
Query: 526 HDSLIYDLLIECCSEIGMFELALHMFDEMSKRKLNPGFNTFASVLNGACRYQNHEMIKFA 347
IY L+EC S G F+ + EM +KL F ++ VL+ ACR + E I
Sbjct: 251 ESCKIYTNLVECYSRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKV 310
Query: 346 MESMAEKGYIS-KPLTKHDSLIQKLCSMRKTYAANMLSKTACNS----LENETYGCMLQA 182
+ M EK +++ +D +I++LC M KT+A+ ML + ACN L + TYGCML+A
Sbjct: 311 LCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKA 370
Query: 181 LSMEARVKDAIETYRVIEHRGVQV-NPIFYHEFLNVLCNQD-PSKELNTLLIDMISRGYK 8
LS + R K+A++ YR+I +G+ V + Y EF N LC D S+E LL+D+I RG+
Sbjct: 371 LSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSEEEEELLVDVIKRGFV 430
Query: 7 P 5
P
Sbjct: 431 P 431
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 255 bits (651), Expect = 2e-65
Identities = 150/418 (35%), Positives = 236/418 (56%), Gaps = 10/418 (2%)
Frame = -2
Query: 1237 TTKTTQNWRTQIKHTHLISQISTILLQRHNWPSLLQTLNLK---SKLTPSLFLQILTTTK 1067
+T + +W+TQ + ++IS+ILLQR NW + LQ + K S LT +FLQIL T+
Sbjct: 21 STSSASDWKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPVFLQILRETR 80
Query: 1066 SQPQISLDFFKWAIKNTSFQPDLSVQCRMTHLLIGSGLVHPSKPILNSLLQNNPPAQIVQ 887
P+ +LDFF +A + F+PDL CR+ + SGL+ ++ +L L++ N + +V
Sbjct: 81 KCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVG 140
Query: 886 SLFKSCEKDAIFHSSKASVVFNCVLSWYCEKGFCFQALEVFNLTRDLINSDGSELFSVGS 707
+ + E + SV + VL +Y KG LEVF R L S S +
Sbjct: 141 EMHRWFEGEV-----SLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSP-----SQSA 190
Query: 706 YNTVLNSLQENNEVKLGLCFYGGMIRRGVLIDQFTWRIVARIFSKEGRVDAILRIIDMGV 527
YN++L SL + N+ ++ LC Y M+R G++ D+ TW ++A+I ++GR ++ ++++ GV
Sbjct: 191 YNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGV 250
Query: 526 HDSLIYDLLIECCSEIGMFELALHMFDEMSKRKLNPGFNTFASVLNGACRYQNHEMIKFA 347
IY L+EC S G F+ + EM +KL F ++ VL+ ACR + E I
Sbjct: 251 ESCKIYTNLVECYSRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDKV 310
Query: 346 MESMAEKGYIS-KPLTKHDSLIQKLCSMRKTYAANMLSKTACNS----LENETYGCMLQA 182
+ M EK +++ +D +I++LC M KT+A+ ML + ACN L + TYGCML+A
Sbjct: 311 LCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKA 370
Query: 181 LSMEARVKDAIETYRVIEHRGVQV-NPIFYHEFLNVLCNQD-PSKELNTLLIDMISRG 14
LS + R K+A++ YR+I +G+ V + Y EF N LC D S+E LL+D+I RG
Sbjct: 371 LSRKKRTKEAVDVYRMICRKGITVLDESCYIEFANALCRDDNSSEEEEELLVDVIKRG 428