BLASTX nr result

ID: Atractylodes22_contig00027383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027383
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v...   105   3e-21
ref|XP_002336372.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|NP_200119.1| Ribosomal protein L9/RNase H1 [Arabidopsis thal...    99   4e-19
ref|XP_002317788.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
           gi|302143920|emb|CBI23025.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/70 (72%), Positives = 59/70 (84%)
 Frame = +3

Query: 3   NHLMPKLLAVPNIEKFAYLIREQRKLYQPKEVEEVKVLHKTEEDTMKEYQTAARRLANAK 182
           NHLMPKLLAVPNIEKFAYLI EQRKLYQP+EVEEVK + +TEED MKEY TAA+RL   +
Sbjct: 69  NHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDKMKEYHTAAKRLETTR 128

Query: 183 LVLRKFIKID 212
           +  R+FIK +
Sbjct: 129 VAFRRFIKFE 138


>ref|XP_002336372.1| predicted protein [Populus trichocarpa] gi|222834835|gb|EEE73284.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 3   NHLMPKLLAVPNIEKFAYLIREQRKLYQPKEVEEVKVLHKTEEDTMKEYQTAARRLANAK 182
           NHLMPKLLAVPNIEKFA+LIREQRK+YQP+E EEVKV+ +T ED MKEY+TAA+RL  A+
Sbjct: 70  NHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKRLVKAR 129

Query: 183 LVLR 194
           L  R
Sbjct: 130 LAFR 133


>ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|222875210|gb|EEF12341.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = +3

Query: 3   NHLMPKLLAVPNIEKFAYLIREQRKLYQPKEVEEVKVLHKTEEDTMKEYQTAARRLANAK 182
           NHLMPKLLAVPNIEKFA+LIREQRK+YQP+E EEVKV+ +T ED MKEY+TAA+RL  A+
Sbjct: 70  NHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKRLVKAQ 129

Query: 183 LVLR 194
           L  R
Sbjct: 130 LAFR 133


>ref|NP_200119.1| Ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
           gi|8809596|dbj|BAA97147.1| unnamed protein product
           [Arabidopsis thaliana] gi|27754507|gb|AAO22701.1|
           unknown protein [Arabidopsis thaliana]
           gi|28393965|gb|AAO42390.1| unknown protein [Arabidopsis
           thaliana] gi|332008917|gb|AED96300.1| Ribosomal protein
           L9/RNase H1 [Arabidopsis thaliana]
          Length = 221

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/68 (73%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   NHLMPKLLAVPNIEKFAYLIREQRKLYQPKEV-EEVKVLHKTEEDTMKEYQTAARRLANA 179
           NHLMPKLLAVPNI+K+AYLIREQRK+Y  +EV EEVKV+HKT E   KEY+ AA+RLANA
Sbjct: 71  NHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEYEKAAKRLANA 130

Query: 180 KLVLRKFI 203
            LVLRK +
Sbjct: 131 NLVLRKLV 138


>ref|XP_002317788.1| predicted protein [Populus trichocarpa] gi|222858461|gb|EEE96008.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = +3

Query: 3   NHLMPKLLAVPNIEKFAYLIREQRKLYQPKEVEEVKVLHKTEEDTMKEYQTAARRLANAK 182
           NHLMPKLLAVPNIEKFA+LIREQRK+YQP+E EEVKV+ +T ED MKEY+TAA+R   A+
Sbjct: 70  NHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKRFVKAR 129

Query: 183 LVLR 194
           L  R
Sbjct: 130 LAFR 133


Top