BLASTX nr result

ID: Atractylodes22_contig00027346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027346
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...    66   3e-09
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]    66   3e-09
gb|ACN27128.1| unknown [Zea mays]                                      64   1e-08
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Ze...    64   1e-08

>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -3

Query: 385 SLRKDTALPSPEWSSDHIALMAEFRCKTRTRR 290
           SLRKDTALPSPEWSSDHIAL+AEFRCK RTRR
Sbjct: 572 SLRKDTALPSPEWSSDHIALLAEFRCKPRTRR 603


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -3

Query: 385 SLRKDTALPSPEWSSDHIALMAEFRCKTRTRR 290
           SLRKDTALPSPEWSSDHIAL+AEFRCK RTRR
Sbjct: 572 SLRKDTALPSPEWSSDHIALLAEFRCKPRTRR 603


>gb|ACN27128.1| unknown [Zea mays]
          Length = 75

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 385 SLRKDTALPSPEWSSDHIALMAEFRCKTRTRR 290
           SLRKDTALPSPEWSSDHIAL+AEFRCK R RR
Sbjct: 44  SLRKDTALPSPEWSSDHIALLAEFRCKLRVRR 75


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 385 SLRKDTALPSPEWSSDHIALMAEFRCKTRTRR 290
           SLRKDTALPSPEWSSDHIAL+AEFRCK R RR
Sbjct: 571 SLRKDTALPSPEWSSDHIALLAEFRCKNRPRR 602


>ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Zea mays]
           gi|195606510|gb|ACG25085.1| CCR4-NOT transcription
           complex subunit 6 [Zea mays]
           gi|414865007|tpg|DAA43564.1| TPA: CCR4-NOT transcription
           complex subunit 6 [Zea mays]
          Length = 620

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -3

Query: 385 SLRKDTALPSPEWSSDHIALMAEFRCKTRTRR 290
           SLRKDTALPSPEWSSDHIAL+AEFRCK R RR
Sbjct: 589 SLRKDTALPSPEWSSDHIALLAEFRCKLRVRR 620