BLASTX nr result

ID: Atractylodes22_contig00025740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025740
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]              122   6e-26
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t...   122   6e-26
gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulga...   122   6e-26
ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arab...   122   6e-26
dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]   122   6e-26

>gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
          Length = 675

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -2

Query: 192 AVETDKDVLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPSCASHLTTNQLFPNF 13
           A + DKD+LCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCP C+ HLT NQL+PNF
Sbjct: 43  APDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNF 102

Query: 12  LLNK 1
           LL+K
Sbjct: 103 LLDK 106


>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
           gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
           ubiquitin-protein ligase COP1; AltName:
           Full=Constitutive photomorphogenesis protein 1
           gi|2702280|gb|AAB91983.1| COP1 regulatory protein
           [Arabidopsis thaliana] gi|95147316|gb|ABF57293.1|
           At2g32950 [Arabidopsis thaliana]
           gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase
           COP1 [Arabidopsis thaliana]
          Length = 675

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -2

Query: 192 AVETDKDVLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPSCASHLTTNQLFPNF 13
           A + DKD+LCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCP C+ HLT NQL+PNF
Sbjct: 43  APDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNF 102

Query: 12  LLNK 1
           LL+K
Sbjct: 103 LLDK 106


>gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
          Length = 474

 Score =  122 bits (305), Expect = 6e-26
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -2

Query: 186 ETDKDVLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPSCASHLTTNQLFPNFLL 7
           ETDKD++CPICMQ+IKDAFLT+CGHSFCYMCI+THL+NKSDCP C  HLT NQL+PNFLL
Sbjct: 6   ETDKDLMCPICMQMIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGRHLTNNQLYPNFLL 65

Query: 6   NK 1
           +K
Sbjct: 66  DK 67


>ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
           lyrata] gi|297325264|gb|EFH55684.1| hypothetical protein
           ARALYDRAFT_902362 [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -2

Query: 192 AVETDKDVLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPSCASHLTTNQLFPNF 13
           A + DKD+LCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCP C+ HLT NQL+PNF
Sbjct: 43  APDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNF 102

Query: 12  LLNK 1
           LL+K
Sbjct: 103 LLDK 106


>dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
          Length = 391

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/64 (79%), Positives = 59/64 (92%)
 Frame = -2

Query: 192 AVETDKDVLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPSCASHLTTNQLFPNF 13
           A + DKD+LCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCP C+ HLT NQL+PNF
Sbjct: 43  APDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNF 102

Query: 12  LLNK 1
           LL+K
Sbjct: 103 LLDK 106


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