BLASTX nr result

ID: Atractylodes22_contig00025736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025736
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin...   109   3e-22
gb|AFK43582.1| unknown [Lotus japonicus]                              107   1e-21
ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin...   103   2e-20
gb|ACU22738.1| unknown [Glycine max]                                  103   2e-20
ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20

>ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 324

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/62 (85%), Positives = 54/62 (87%)
 Frame = -3

Query: 214 SGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLR 35
           SGHCFDRLLSPSE+  D E QQQGG TDEAEPFMGSGRFARAY LGYNC DEKELEA LR
Sbjct: 264 SGHCFDRLLSPSEMEPDTE-QQQGGVTDEAEPFMGSGRFARAYSLGYNCADEKELEATLR 322

Query: 34  FC 29
           FC
Sbjct: 323 FC 324


>gb|AFK43582.1| unknown [Lotus japonicus]
          Length = 328

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/62 (83%), Positives = 54/62 (87%)
 Frame = -3

Query: 214 SGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLR 35
           SGHCFDRLLSP+E+  D E QQQGGA DEAEPFMGSGRFARAY LGYNC DEKELEA LR
Sbjct: 268 SGHCFDRLLSPAEMEPDAE-QQQGGAADEAEPFMGSGRFARAYLLGYNCADEKELEATLR 326

Query: 34  FC 29
           FC
Sbjct: 327 FC 328


>ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 325

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/62 (80%), Positives = 50/62 (80%)
 Frame = -3

Query: 214 SGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLR 35
           SGHC DRLLSPSE      EQQQGG  DEAEPFMGSGRFARAY LGYNC DEKELEA LR
Sbjct: 264 SGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFARAYLLGYNCADEKELEATLR 323

Query: 34  FC 29
           FC
Sbjct: 324 FC 325


>gb|ACU22738.1| unknown [Glycine max]
          Length = 202

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/62 (80%), Positives = 50/62 (80%)
 Frame = -3

Query: 214 SGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLR 35
           SGHC DRLLSPSE      EQQQGG  DEAEPFMGSGRFARAY LGYNC DEKELEA LR
Sbjct: 141 SGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFARAYLLGYNCADEKELEATLR 200

Query: 34  FC 29
           FC
Sbjct: 201 FC 202


>ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = -3

Query: 214 SGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLR 35
           SGHCFDR L PSE+  D  +QQQGG TDEAEPFMGSGRFARAY LGYNC+D+KELEA LR
Sbjct: 270 SGHCFDRWLLPSEMEPD-PDQQQGGLTDEAEPFMGSGRFARAYLLGYNCDDDKELEAALR 328

Query: 34  FC 29
           FC
Sbjct: 329 FC 330


Top