BLASTX nr result

ID: Atractylodes22_contig00025439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025439
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26285.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   130   1e-28
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   126   2e-27
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   125   5e-27
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   121   5e-26

>emb|CBI26285.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/117 (59%), Positives = 82/117 (70%)
 Frame = +3

Query: 90  TALLLRRGLSPSTVYRTRFCNANMHASWLLWDLKIGALVRIWVSSRQFSSSTGAVKIDFT 269
           ++ LLRR LS S +  T   +  M       +L+   LV +    RQFSSS+   K+DF 
Sbjct: 3   SSFLLRRHLSFSGISPT--FHGTMEPFHRHLELRFRILVGVCNRIRQFSSSSSTSKLDFM 60

Query: 270 DLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYCGPLRLLAWEV 440
           DLT PHTWYP ARRK R VI+HVGPTNSGKTHHALK+LE SSSG+YCGPLRLLAWEV
Sbjct: 61  DLTHPHTWYPNARRKSRKVIMHVGPTNSGKTHHALKRLESSSSGIYCGPLRLLAWEV 117


>ref|XP_002279035.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Vitis vinifera]
          Length = 572

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/86 (70%), Positives = 69/86 (80%)
 Frame = +3

Query: 183 DLKIGALVRIWVSSRQFSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKT 362
           +L+   LV +    RQFSSS+   K+DF DLT PHTWYP ARRK R VI+HVGPTNSGKT
Sbjct: 36  ELRFRILVGVCNRIRQFSSSSSTSKLDFMDLTHPHTWYPNARRKSRKVIMHVGPTNSGKT 95

Query: 363 HHALKQLELSSSGVYCGPLRLLAWEV 440
           HHALK+LE SSSG+YCGPLRLLAWEV
Sbjct: 96  HHALKRLESSSSGIYCGPLRLLAWEV 121


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score =  126 bits (317), Expect = 2e-27
 Identities = 69/120 (57%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
 Frame = +3

Query: 87  MTALLLR-RGLSPSTVYRTRFCNA-NMHASWLLWDLKIGALVRIWVSSRQFSSSTGAVKI 260
           M +LLLR R    S++  +R  NA N     L  + K GAL  +   +R + S  G  KI
Sbjct: 1   MASLLLRLRQRKVSSLGISRLLNAENGEPFQLHAEFKFGALFSVHTLTRLYRSDNGKPKI 60

Query: 261 DFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYCGPLRLLAWEV 440
           DFTDLT PH+WYP AR+K R V LHVGPTNSGKTHHALK+L  S SG+YCGPLRLLAWEV
Sbjct: 61  DFTDLTCPHSWYPSARKKHRKVTLHVGPTNSGKTHHALKRLASSPSGIYCGPLRLLAWEV 120


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 600

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/70 (81%), Positives = 62/70 (88%)
 Frame = +3

Query: 231 FSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYC 410
           +SSS G ++ DFTDLT PHTWYP ARRK R VILHVGPTNSGKTHHALKQLE S+SGVYC
Sbjct: 80  YSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPTNSGKTHHALKQLESSASGVYC 139

Query: 411 GPLRLLAWEV 440
           GPLRLLAWE+
Sbjct: 140 GPLRLLAWEI 149


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 565

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/70 (77%), Positives = 61/70 (87%)
 Frame = +3

Query: 231 FSSSTGAVKIDFTDLTRPHTWYPIARRKKRNVILHVGPTNSGKTHHALKQLELSSSGVYC 410
           +SS  G ++ DFTDLT PHTWYP AR+K R +ILHVGPTNSGKTHHALKQLE S+SGVYC
Sbjct: 45  YSSRNGPIRNDFTDLTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYC 104

Query: 411 GPLRLLAWEV 440
           GPLRLLAWE+
Sbjct: 105 GPLRLLAWEI 114


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