BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025407
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...    69   3e-10
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li...    69   5e-10
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...    67   1e-09
emb|CBI24290.3| unnamed protein product [Vitis vinifera]               67   1e-09

>ref|XP_002298160.1| predicted protein [Populus trichocarpa] gi|222845418|gb|EEE82965.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/94 (50%), Positives = 54/94 (57%)
 Frame = -1

Query: 283 VQGGQESSGRRKTSKYFATDKQNQEDATEVSGLSAKRKLQKSCVQSSADVKPPPGKKLHT 104
           V GGQE SGRRKTSKYFA +KQ Q++  E+  L AKRK Q   VQS   VKPPP KK+H 
Sbjct: 39  VCGGQEGSGRRKTSKYFAANKQKQKEDKEIEDLPAKRKAQNDGVQS---VKPPPSKKVHK 95

Query: 103 VXXXXXXXXXDFVLSKTGKSSVETTPSKKLKSGS 2
           V              K      + +PSKKLKS S
Sbjct: 96  VDDEEEDDDFSLPKKKN-----DASPSKKLKSSS 124


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|13374860|emb|CAC34494.1| replication factor C large
           subunit-like protein [Arabidopsis thaliana]
           gi|48958527|gb|AAT47816.1| At5g22010 [Arabidopsis
           thaliana] gi|332005585|gb|AED92968.1| replication factor
           C1 [Arabidopsis thaliana]
          Length = 956

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
 Frame = -1

Query: 379 NGNTPKPVKPTLTIPGKLSTAKDAALSSPVKSVQGGQ--ESSGRRKTSKYFATDKQNQED 206
           NG+ PK          K    K+AA ++P+KS Q  +  E++ RRKTSKYF  DK   +D
Sbjct: 16  NGSAPKSTS------SKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYFGKDKTKVKD 69

Query: 205 ATEVSGLSAKRKLQKSCVQSSADVKPPPGKKLHTVXXXXXXXXXDFVLSKTGKSSVETTP 26
             EV  + AKRKL+    +S   VKP P K    V                 + + +TTP
Sbjct: 70  EKEVEAIPAKRKLK---TESDDLVKPRPRKVTKVVDDDDDDFDVPI-----SRKTRDTTP 121

Query: 25  SKKLKSGS 2
           SKKLKSGS
Sbjct: 122 SKKLKSGS 129


>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 942

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 51/126 (40%), Positives = 64/126 (50%)
 Frame = -1

Query: 379 NGNTPKPVKPTLTIPGKLSTAKDAALSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDAT 200
           NG+  K  KP    P  L  +  A  + P      G ES+GR+ TSKYFA++KQ  +DA 
Sbjct: 16  NGSGSKKAKPA---PSSLEKSASAGKTGP-----SGGESAGRQITSKYFASEKQEAKDAE 67

Query: 199 EVSGLSAKRKLQKSCVQSSADVKPPPGKKLHTVXXXXXXXXXDFVLSKTGKSSVETTPSK 20
           E     AKRK QK   +S    K  P KK + V           VLS + K+  E TP+K
Sbjct: 68  ETEESPAKRKFQKYNEESP---KASPLKKSNKVDDNDDDA----VLSSSKKNMSEVTPNK 120

Query: 19  KLKSGS 2
           KLKSGS
Sbjct: 121 KLKSGS 126


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 52/126 (41%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -1

Query: 379 NGNTPKPVKPTLTIPGKLSTAKDA-ALSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDA 203
           NGN  KP KP    P    + K + A     K V GGQESS RRKTSKYF    Q  +D 
Sbjct: 20  NGNPLKPAKPE---PKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF----QKPKDE 72

Query: 202 TEVSGLSAKRKLQKSCVQSSADVKPPPGKKLHTVXXXXXXXXXDFVLSKTGKSSVETTPS 23
            E+  L AKRK QK   +S   + PPP KK+  V         DFVL K+    V+    
Sbjct: 73  KEMEELPAKRKTQKGTKES---LNPPPSKKIRRV---VDDDDDDFVLHKSDDEKVDKDTE 126

Query: 22  KKLKSG 5
             +KSG
Sbjct: 127 PPIKSG 132


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 52/126 (41%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -1

Query: 379 NGNTPKPVKPTLTIPGKLSTAKDA-ALSSPVKSVQGGQESSGRRKTSKYFATDKQNQEDA 203
           NGN  KP KP    P    + K + A     K V GGQESS RRKTSKYF    Q  +D 
Sbjct: 20  NGNPLKPAKPE---PKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKYF----QKPKDE 72

Query: 202 TEVSGLSAKRKLQKSCVQSSADVKPPPGKKLHTVXXXXXXXXXDFVLSKTGKSSVETTPS 23
            E+  L AKRK QK   +S   + PPP KK+  V         DFVL K+    V+    
Sbjct: 73  KEMEELPAKRKTQKGTKES---LNPPPSKKIRRV---VDDDDDDFVLHKSDDEKVDKDTE 126

Query: 22  KKLKSG 5
             +KSG
Sbjct: 127 PPIKSG 132