BLASTX nr result

ID: Atractylodes22_contig00025382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025382
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containin...    94   1e-17
gb|ACU24233.1| unknown [Glycine max]                                   94   1e-17
ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...    90   2e-16

>ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|222850432|gb|EEE87979.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  103 bits (258), Expect = 1e-20
 Identities = 61/100 (61%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
 Frame = +2

Query: 17  LSGPGKPKPVAXXXXXXXXXXXXXKINQVPSSGKLAFSLKQKSKLVAPAVKLSED-EDED 193
           +SG   PKP               K +Q  SSGKLAFSLKQKSKLVAPAVKL ED EDED
Sbjct: 48  VSGTVTPKPSFGKVTMQFKTNDASKTSQTASSGKLAFSLKQKSKLVAPAVKLGEDDEDED 107

Query: 194 EKNAGKASGGGPIKRQKLDQPDVSEQSLKQVDVAPPCPSD 313
           E +A   SGG   KRQKL Q D SEQSLK++DVAPP PSD
Sbjct: 108 EADAVNTSGGVSAKRQKLGQLDASEQSLKRLDVAPPPPSD 147


>ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Glycine max]
          Length = 436

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/99 (53%), Positives = 61/99 (61%)
 Frame = +2

Query: 17  LSGPGKPKPVAXXXXXXXXXXXXXKINQVPSSGKLAFSLKQKSKLVAPAVKLSEDEDEDE 196
           +SG   P P               KI+Q  SSGKLAFSLKQKSKLV P VKLS DEDE+E
Sbjct: 44  ISGSLSPNPSFTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEE 103

Query: 197 KNAGKASGGGPIKRQKLDQPDVSEQSLKQVDVAPPCPSD 313
             AG  S   P+KRQKL Q +  +QS +Q+DVAP  PSD
Sbjct: 104 TEAGYVSNDAPLKRQKLGQEEGIDQSSRQLDVAPHSPSD 142


>gb|ACU24233.1| unknown [Glycine max]
          Length = 433

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/99 (53%), Positives = 61/99 (61%)
 Frame = +2

Query: 17  LSGPGKPKPVAXXXXXXXXXXXXXKINQVPSSGKLAFSLKQKSKLVAPAVKLSEDEDEDE 196
           +SG   P P               KI+Q  SSGKLAFSLKQKSKLV P VKLS DEDE+E
Sbjct: 44  ISGSLSPNPSFTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEE 103

Query: 197 KNAGKASGGGPIKRQKLDQPDVSEQSLKQVDVAPPCPSD 313
             AG  S   P+KRQKL Q +  +QS +Q+DVAP  PSD
Sbjct: 104 TEAGYVSNDAPLKRQKLGQEEGIDQSSRQLDVAPHSPSD 142


>ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|222845703|gb|EEE83250.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/100 (56%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +2

Query: 17  LSGPGKPKPVAXXXXXXXXXXXXXKINQVPSSGKLAFSLKQKSKLVAPAVKLSEDE-DED 193
           +SG   PKP               K     S GKLAFSLKQKSKL+APAVKL EDE DED
Sbjct: 48  VSGSVTPKPSFGKVTMQLKANDGRKTPPTASGGKLAFSLKQKSKLMAPAVKLGEDEEDED 107

Query: 194 EKNAGKASGGGPIKRQKLDQPDVSEQSLKQVDVAPPCPSD 313
           E +A  ASG    KRQKL Q D SEQS +++DVAPP PSD
Sbjct: 108 EVDAVNASGDVSAKRQKLGQLDTSEQSSRRLDVAPPPPSD 147


>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
           communis] gi|223547687|gb|EEF49180.1| arginine/serine
           rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/99 (53%), Positives = 57/99 (57%)
 Frame = +2

Query: 17  LSGPGKPKPVAXXXXXXXXXXXXXKINQVPSSGKLAFSLKQKSKLVAPAVKLSEDEDEDE 196
           +SG   PKP               K  Q PS GKLAFSLKQKSK+V P VKL   EDED+
Sbjct: 48  ISGTLAPKPSTGKISLQFKANNANKTPQPPSGGKLAFSLKQKSKIVTPVVKLG--EDEDD 105

Query: 197 KNAGKASGGGPIKRQKLDQPDVSEQSLKQVDVAPPCPSD 313
            + G  SG    KRQKL Q D SE S KQVDVAP  PSD
Sbjct: 106 ADVGNVSGDASAKRQKLSQSDSSELSSKQVDVAPLSPSD 144


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