BLASTX nr result

ID: Atractylodes22_contig00025286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025286
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   162   3e-38
ref|XP_002529591.1| conserved hypothetical protein [Ricinus comm...   157   8e-37
ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
ref|XP_002873092.1| zinc finger family protein [Arabidopsis lyra...   150   8e-35

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/154 (54%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
 Frame = -1

Query: 464 ARRXXXXXXXXXXTKISLIAPDEREDIQLPANSKAVRALCVKPCS-RLVLIASLGKKLSV 288
           ARR          TK+SLI+P E EDI LP+ +KAV+ L V P   RL L+ASLGKKLSV
Sbjct: 289 ARRLSGTGGTHVLTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSV 348

Query: 287 VSTESNNTILTYDLPAPAWSCSWDINSSHHVYTGLQNGMLLAFDMRQTRTPLESRTGLSC 108
           +S ESNN ILTYDLP  AWSCSWD+NSSH++Y GLQNGML+ FDMRQT  P+   +G + 
Sbjct: 349 LSMESNNVILTYDLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTS 408

Query: 107 NPVHTVISVAPNXXXXXXXXXXXXXSQIGICEWN 6
           NP+HT+ SV  N             S +G+C+WN
Sbjct: 409 NPIHTIQSVLHNSTLPSGVSTLLSASSVGLCQWN 442


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/154 (54%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
 Frame = -1

Query: 464 ARRXXXXXXXXXXTKISLIAPDEREDIQLPANSKAVRALCVKPCS-RLVLIASLGKKLSV 288
           ARR          TK+SLI+P E EDI LP+ +KAV+ L V P   RL L+ASLGKKLSV
Sbjct: 246 ARRLSGTGGTHVLTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSV 305

Query: 287 VSTESNNTILTYDLPAPAWSCSWDINSSHHVYTGLQNGMLLAFDMRQTRTPLESRTGLSC 108
           +S ESNN ILTYDLP  AWSCSWD+NSSH++Y GLQNGML+ FDMRQT  P+   +G + 
Sbjct: 306 LSMESNNVILTYDLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTS 365

Query: 107 NPVHTVISVAPNXXXXXXXXXXXXXSQIGICEWN 6
           NP+HT+ SV  N             S +G+C+WN
Sbjct: 366 NPIHTIQSVLHNSTLPSGVSTLLSASSVGLCQWN 399


>ref|XP_002529591.1| conserved hypothetical protein [Ricinus communis]
           gi|223530924|gb|EEF32783.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/154 (49%), Positives = 99/154 (64%)
 Frame = -1

Query: 464 ARRXXXXXXXXXXTKISLIAPDEREDIQLPANSKAVRALCVKPCSRLVLIASLGKKLSVV 285
           ARR           KI+LI P E EDIQLP ++K V+ L + PC RL L+ASLGKKLS++
Sbjct: 197 ARRISGMGGIHMLNKINLINPHENEDIQLPTSTKTVKDLQISPCGRLTLLASLGKKLSIL 256

Query: 284 STESNNTILTYDLPAPAWSCSWDINSSHHVYTGLQNGMLLAFDMRQTRTPLESRTGLSCN 105
           S ESN+ + TY+L  PAWSCSWD+NS H++Y GLQNGM+L FDMR T  PL+S  GL+  
Sbjct: 257 SMESNSIVTTYNLRVPAWSCSWDLNSPHYMYAGLQNGMILVFDMRHTVNPLQSMIGLTPR 316

Query: 104 PVHTVISVAPNXXXXXXXXXXXXXSQIGICEWNI 3
           P+HT+ S+  N             S +G C W++
Sbjct: 317 PIHTIHSLVHNPALGQNAQKLLTASSLGPCVWDV 350


>ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|222865435|gb|EEF02566.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/139 (53%), Positives = 95/139 (68%)
 Frame = -1

Query: 422 KISLIAPDEREDIQLPANSKAVRALCVKPCSRLVLIASLGKKLSVVSTESNNTILTYDLP 243
           KI+LI P E EDIQLP ++KAV+ + + PC +L L+ASLGKKLS++S ESNN ++TY+L 
Sbjct: 295 KINLINPRENEDIQLPPSTKAVKDIQISPCGKLTLLASLGKKLSILSMESNNIVVTYNLR 354

Query: 242 APAWSCSWDINSSHHVYTGLQNGMLLAFDMRQTRTPLESRTGLSCNPVHTVISVAPNXXX 63
            PAWSCSWD+NS H+VY GLQNGMLL FDMR T  PL+S  G    P+HT+  +A N   
Sbjct: 355 VPAWSCSWDLNSPHYVYAGLQNGMLLVFDMRGTLNPLQSMVGPVLGPIHTMHPLAQNPVL 414

Query: 62  XXXXXXXXXXSQIGICEWN 6
                     S +G C WN
Sbjct: 415 GSNSQKLLTASSLGPCVWN 433


>ref|XP_002873092.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318929|gb|EFH49351.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
 Frame = -1

Query: 464 ARRXXXXXXXXXXTKISLIAPDEREDIQLPANSKAVRALCVKPCSR-LVLIASLGKKLSV 288
           ARR          T++SL +  E +DI LP  ++A++ L + P S  L +  SLGKKLSV
Sbjct: 295 ARRLPGVGGTFVLTQMSLHSSGEIDDILLPPTTRAIKDLHLSPHSNGLAVFGSLGKKLSV 354

Query: 287 VSTESNNTILTYDLPAPAWSCSWDINSSHHVYTGLQNGMLLAFDMRQTRTPLESRTGLSC 108
           +S ES+NT+L+YDLPA  WSCSWD+NSSHH+Y GLQNGM+L FDMRQT  P  S TG++ 
Sbjct: 355 ISLESHNTVLSYDLPAAPWSCSWDLNSSHHIYAGLQNGMVLVFDMRQTTGPFASMTGVTT 414

Query: 107 NPVHTVISVAPNXXXXXXXXXXXXXSQIGICEWNI 3
           NPVHT+  ++ N             S IG+C+WNI
Sbjct: 415 NPVHTIHHLSGNSTPTSDVRTLLSASSIGLCQWNI 449


Top