BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025243
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure...    62   1e-07
ref|NP_176723.3| transcription elongation factor SPT6 [Arabidops...    62   1e-07
emb|CBH16214.1| HNRNPA [Trypanosoma brucei gambiense DAL972]           60   3e-07
ref|XP_823301.1| hypothetical protein [Trypanosoma brucei brucei...    59   1e-06
gb|EGT49137.1| hypothetical protein CAEBREN_25033 [Caenorhabditi...    56   7e-06

>gb|AAC27151.1| Similar to gb|U46691 putative chromatin structure regulator (SUPT6H)
            from Homo sapiens. ESTs gb|T42908, gb|AA586170 and
            gb|AA395125 come from this gene [Arabidopsis thaliana]
          Length = 1684

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
 Frame = +3

Query: 60   GWSS--------GNQTGGWGSSGAGNKDDAQGSEWGSRDGGKKTELPGSGWG---GGGDE 206
            GW S        G  TGGWGS   GNK D  GS WGS  GG  +     GWG   GG   
Sbjct: 1567 GWGSESAGKKTGGGSTGGWGSESGGNKSDGAGS-WGSGSGGGGS----GGWGNDSGGKKS 1621

Query: 207  NASGGWGSSKAAQGSGWGDQT 269
            +  GG+GS     GS WG+++
Sbjct: 1622 SEDGGFGSGSGGGGSDWGNES 1642



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 16/81 (19%)
 Frame = +3

Query: 66   SSGNQTGGWGSSGAGNKDDAQG----------SEWGSRDGGKKTELPGSGWG---GGGDE 206
            S G  +GGWG+   G K    G          S+WG+  GGKK+   G GWG   GG   
Sbjct: 1604 SGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSDWGNESGGKKSSADG-GWGSESGGKKS 1662

Query: 207  NASGGWG---SSKAAQGSGWG 260
            +  GGWG   SS+ + G G G
Sbjct: 1663 DGEGGWGNEPSSRKSDGGGGG 1683


>ref|NP_176723.3| transcription elongation factor SPT6 [Arabidopsis thaliana]
            gi|332196252|gb|AEE34373.1| transcription elongation
            factor SPT6 [Arabidopsis thaliana]
          Length = 1647

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
 Frame = +3

Query: 60   GWSS--------GNQTGGWGSSGAGNKDDAQGSEWGSRDGGKKTELPGSGWG---GGGDE 206
            GW S        G  TGGWGS   GNK D  GS WGS  GG  +     GWG   GG   
Sbjct: 1530 GWGSESAGKKTGGGSTGGWGSESGGNKSDGAGS-WGSGSGGGGS----GGWGNDSGGKKS 1584

Query: 207  NASGGWGSSKAAQGSGWGDQT 269
            +  GG+GS     GS WG+++
Sbjct: 1585 SEDGGFGSGSGGGGSDWGNES 1605



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 16/81 (19%)
 Frame = +3

Query: 66   SSGNQTGGWGSSGAGNKDDAQG----------SEWGSRDGGKKTELPGSGWG---GGGDE 206
            S G  +GGWG+   G K    G          S+WG+  GGKK+   G GWG   GG   
Sbjct: 1567 SGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSDWGNESGGKKSSADG-GWGSESGGKKS 1625

Query: 207  NASGGWG---SSKAAQGSGWG 260
            +  GGWG   SS+ + G G G
Sbjct: 1626 DGEGGWGNEPSSRKSDGGGGG 1646


>emb|CBH16214.1| HNRNPA [Trypanosoma brucei gambiense DAL972]
          Length = 340

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/72 (48%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +3

Query: 60  GWSSGNQTGGWGS-SGAGNKDDAQGS----EWGSRDGGKKTELPGSGWGGGGDENASGGW 224
           GW  G+  GGWGS  G GN     GS     WGS  GG      G GWG GG   A GGW
Sbjct: 18  GWGGGSSGGGWGSDDGPGNGSGGGGSGGRGGWGSGGGG------GGGWGSGG--GAGGGW 69

Query: 225 GSSKAAQGSGWG 260
           GS   A G GWG
Sbjct: 70  GSGGGA-GGGWG 80


>ref|XP_823301.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1] gi|70832969|gb|EAN78473.1| RNA-binding
           protein, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 320

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/72 (47%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +3

Query: 60  GWSSGNQTGGWGS-SGAGNKDDAQGS----EWGSRDGGKKTELPGSGWGGGGDENASGGW 224
           GW  G+  GGWGS  G GN     GS     WGS  GG      G GWG GG  N  GGW
Sbjct: 18  GWGGGSSGGGWGSDDGPGNGSGGGGSGGRGGWGSGGGG------GGGWGSGGGGN--GGW 69

Query: 225 GSSKAAQGSGWG 260
           GS     G GWG
Sbjct: 70  GSG-GGGGGGWG 80


>gb|EGT49137.1| hypothetical protein CAEBREN_25033 [Caenorhabditis brenneri]
          Length = 203

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
 Frame = +3

Query: 60  GWSSGN---QTGGWGS-SGAGNKDDAQ-GSEWGSRDGGKKTELPGSGWGG-GGDENASGG 221
           GW+ GN   + GGWG  +G GN    Q G +WG   GG +    G GWGG  G  N  G 
Sbjct: 73  GWNGGNGGGRGGGWGGKNGGGNWGGNQGGGDWGGNGGGGR---GGGGWGGNNGGGNGGGN 129

Query: 222 WGSSKAAQGSGWG 260
           WG +      GWG
Sbjct: 130 WGGNGGGNDGGWG 142