BLASTX nr result

ID: Atractylodes22_contig00025219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025219
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...   145   1e-32
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   142   1e-31
ref|XP_002302948.1| high mobility group family [Populus trichoca...   139   8e-31
ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula...   136   5e-30
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   135   2e-29

>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score =  145 bits (366), Expect = 1e-32
 Identities = 83/179 (46%), Positives = 95/179 (53%)
 Frame = +2

Query: 68  MATEEVNKPSSLPPYPEVIIXXXXXXXXXXXXIELVS*VGSEIGFEN*IVGCFEQMIFEA 247
           MAT EVNKP SLPPYPE+I+                                      +A
Sbjct: 1   MATREVNKPLSLPPYPELIL--------------------------------------KA 22

Query: 248 IDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHLNKLKESGDLVFVKNNYMRPDPN 427
           ID+L +  GSNK+ ISN+IES YG+LP GH  +L YHLN++KESGDLVF KNNY+RPDPN
Sbjct: 23  IDSLNEPNGSNKSAISNYIESVYGELPEGHSVVLLYHLNQMKESGDLVFAKNNYLRPDPN 82

Query: 428 TPLKRGRGRPPKAKDQSAIETXXXXXXXXXXXXXXXXXXXXGSEIKRGRGRPKKDPNAP 604
            P KRGRGRPPKAKD  A                            R RGRP KDPNAP
Sbjct: 83  APPKRGRGRPPKAKDPLA------------------SPPSGAVSTPRPRGRPPKDPNAP 123


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  142 bits (357), Expect = 1e-31
 Identities = 81/179 (45%), Positives = 94/179 (52%)
 Frame = +2

Query: 68  MATEEVNKPSSLPPYPEVIIXXXXXXXXXXXXIELVS*VGSEIGFEN*IVGCFEQMIFEA 247
           MATEEVNKP SLPPYPE                                      M+ +A
Sbjct: 1   MATEEVNKPPSLPPYPE--------------------------------------MVMKA 22

Query: 248 IDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHLNKLKESGDLVFVKNNYMRPDPN 427
           +DAL +  GSNK+ IS +IESTYG+LP GH  LL +HLNK+K+SG+LVF+KNNYM+PDPN
Sbjct: 23  LDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHLNKMKDSGELVFLKNNYMKPDPN 82

Query: 428 TPLKRGRGRPPKAKDQSAIETXXXXXXXXXXXXXXXXXXXXGSEIKRGRGRPKKDPNAP 604
            P KRGRGRPPK K      T                         R RGRP KDPNAP
Sbjct: 83  APPKRGRGRPPKPKVPLPPGTVLSP--------------------PRPRGRPPKDPNAP 121


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  139 bits (350), Expect = 8e-31
 Identities = 80/181 (44%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
 Frame = +2

Query: 68  MATEEVNKPSSLPPYPEVIIXXXXXXXXXXXXIELVS*VGSEIGFEN*IVGCFEQMIFEA 247
           MA EE+NKP SLPPYPE                                      MI  A
Sbjct: 1   MAAEEINKPPSLPPYPE--------------------------------------MILSA 22

Query: 248 IDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHLNKLKESGDLVFVKNNYMRPDPN 427
           I+AL +  G NKT IS +IES YGDLPAGH  LL++HLN++K++G+LVF KNNYM+PDPN
Sbjct: 23  IEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHLNRMKDTGELVFWKNNYMKPDPN 82

Query: 428 TPLKRGRGRPPKAKDQSAIETXXXXXXXXXXXXXXXXXXXXGSEI--KRGRGRPKKDPNA 601
            P +RGRGRPPK KD  +                       GS++   R RGRP KDPNA
Sbjct: 83  APPRRGRGRPPKPKDPLS----------------------PGSDLPPARPRGRPPKDPNA 120

Query: 602 P 604
           P
Sbjct: 121 P 121


>ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula]
           gi|217071498|gb|ACJ84109.1| unknown [Medicago
           truncatula] gi|355517628|gb|AES99251.1| HMG-Y-related
           protein A [Medicago truncatula]
           gi|388515525|gb|AFK45824.1| unknown [Medicago
           truncatula]
          Length = 204

 Score =  136 bits (343), Expect = 5e-30
 Identities = 79/179 (44%), Positives = 93/179 (51%)
 Frame = +2

Query: 68  MATEEVNKPSSLPPYPEVIIXXXXXXXXXXXXIELVS*VGSEIGFEN*IVGCFEQMIFEA 247
           MAT+EVNKP SLPPYPE                                      MI +A
Sbjct: 1   MATQEVNKPLSLPPYPE--------------------------------------MIMKA 22

Query: 248 IDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHLNKLKESGDLVFVKNNYMRPDPN 427
           ++AL +  GSNK+ ISN+IES YG+LP GH  +L  HLN++K++GDLVF KNNYM+PDPN
Sbjct: 23  LEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHLNQMKDNGDLVFAKNNYMKPDPN 82

Query: 428 TPLKRGRGRPPKAKDQSAIETXXXXXXXXXXXXXXXXXXXXGSEIKRGRGRPKKDPNAP 604
            P KRGRGRPPK KD  A                            R RGRP KDPNAP
Sbjct: 83  APPKRGRGRPPKPKDPLAPPPAAVLSP------------------PRPRGRPPKDPNAP 123


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  135 bits (339), Expect = 2e-29
 Identities = 78/179 (43%), Positives = 92/179 (51%)
 Frame = +2

Query: 68  MATEEVNKPSSLPPYPEVIIXXXXXXXXXXXXIELVS*VGSEIGFEN*IVGCFEQMIFEA 247
           MAT+EVNKP SLPPYPE                                      MIF A
Sbjct: 1   MATQEVNKPPSLPPYPE--------------------------------------MIFRA 22

Query: 248 IDALKQKEGSNKTLISNFIESTYGDLPAGHVNLLTYHLNKLKESGDLVFVKNNYMRPDPN 427
           I+AL    GSNK+ IS +IESTYG+LP GH +LLT+HLN +K SGDLVF KNNYM+ DP 
Sbjct: 23  IEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGDLVFWKNNYMKRDPT 82

Query: 428 TPLKRGRGRPPKAKDQSAIETXXXXXXXXXXXXXXXXXXXXGSEIKRGRGRPKKDPNAP 604
            P +RGRGRPPK+K    + +                         + RGRP KDPNAP
Sbjct: 83  APPRRGRGRPPKSKSPLPLSSVI--------------------SSPKPRGRPPKDPNAP 121


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