BLASTX nr result

ID: Atractylodes22_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025218
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 ...   112   5e-23
ref|XP_002515731.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
gb|ABK92497.1| unknown [Populus trichocarpa]                           97   1e-18
ref|XP_002327932.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|ABK92522.1| unknown [Populus trichocarpa]                           96   4e-18

>ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 [Vitis vinifera]
           gi|297739312|emb|CBI28963.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  112 bits (279), Expect = 5e-23
 Identities = 59/102 (57%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
 Frame = -2

Query: 299 SDYSKEDFIQLLKRIGAYLSGKVSKV----LNTQDIRSVWAIAGLAVAVIFTWRLFRAPS 132
           ++ SKE+ ++L+K+ GAYL+ K+S +    L   D RSV A+AG AVA+IFTWRL R+PS
Sbjct: 3   AESSKEELVRLIKKFGAYLTVKMSNLFSISLRNLDSRSVGALAGFAVAMIFTWRLLRSPS 62

Query: 131 VPRRRQPKHQAPAPSSSGFNSHPDVNLFHSGISSSSEDSRAQ 6
            P+RRQPK QAPAPSSSG +S     L  SG+ SSSEDSRAQ
Sbjct: 63  GPQRRQPKRQAPAPSSSGVSSQSTTTLAPSGVCSSSEDSRAQ 104


>ref|XP_002515731.1| conserved hypothetical protein [Ricinus communis]
           gi|223545168|gb|EEF46678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  100 bits (250), Expect = 1e-19
 Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
 Frame = -2

Query: 290 SKEDFIQLLKRIGAYLSGKVSKVLNTQ----DIRSVWAIAGLAVAVIFTWRLFRAPSVPR 123
           SKE+ +QL+KR GAY++ K+S + +      D RSV AIAGLAVA++FTWR+ R+P  P+
Sbjct: 11  SKEELVQLIKRFGAYITVKMSNIFSISFYNLDSRSVGAIAGLAVAIVFTWRMLRSPGGPQ 70

Query: 122 RRQPKHQAPAPSSSGFNSHPDVNLFHSGISSSSEDSRAQ 6
           RRQPK QAP  S+S      +  L  SG+ SSSED RAQ
Sbjct: 71  RRQPKRQAPTSSTSVVTPQSNSTLMPSGVCSSSEDLRAQ 109


>gb|ABK92497.1| unknown [Populus trichocarpa]
          Length = 275

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = -2

Query: 299 SDYSKEDFIQLLKRIGAYLSGKVSKVL--NTQDIRSVWAIAGLAVAVIFTWRLFRAPSVP 126
           ++ SK++ +QL+KR  AYL+ K+S +   NT D RSV A+AGLAVA++FTWRL R+ S P
Sbjct: 3   TETSKDELLQLIKRFSAYLTVKISNLFSFNTLDSRSVGAVAGLAVAIVFTWRLLRSNSGP 62

Query: 125 RRRQPKHQAPAPSSSGFNSHPD-VNLFHSGISSSSEDSRAQ 6
           RRRQPK QA   SSS   + P+ V++   G+ SSSED R Q
Sbjct: 63  RRRQPKRQASTTSSSVVTTQPNAVSIPSGGVCSSSEDLRVQ 103


>ref|XP_002327932.1| predicted protein [Populus trichocarpa] gi|222837341|gb|EEE75720.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = -2

Query: 299 SDYSKEDFIQLLKRIGAYLSGKVSKVL--NTQDIRSVWAIAGLAVAVIFTWRLFRAPSVP 126
           ++ SK++ +QL+KR  AYL+ K+S +   NT D RSV A+AGLAVA++FTWR  R+ S P
Sbjct: 3   TETSKDELLQLVKRFSAYLTVKMSNLFSFNTPDSRSVGAVAGLAVAIVFTWRWLRSNSGP 62

Query: 125 RRRQPKHQAPAPSSSGFNSHPD-VNLFHSGISSSSEDSRAQ 6
           +RRQPK QAP  SSS   + P+ V++   G+ SSSED R Q
Sbjct: 63  QRRQPKRQAPTTSSSVVTTQPNAVSIPSGGVCSSSEDLRVQ 103


>gb|ABK92522.1| unknown [Populus trichocarpa]
          Length = 275

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = -2

Query: 299 SDYSKEDFIQLLKRIGAYLSGKVSKVL--NTQDIRSVWAIAGLAVAVIFTWRLFRAPSVP 126
           ++ SK++ +QL+KR  AYL+ K+S +   NT D RSV A+AGLAVA++FTWR  R+ S P
Sbjct: 3   TETSKDELLQLVKRFSAYLTVKMSNLFSFNTPDSRSVGAVAGLAVAIVFTWRWLRSNSGP 62

Query: 125 RRRQPKHQAPAPSSSGFNSHPD-VNLFHSGISSSSEDSRAQ 6
           +RRQPK QAP  SSS   + P+ V++   G+ SSSED R Q
Sbjct: 63  QRRQPKRQAPTTSSSVVTTQPNAVSIPSGGVCSSSEDLRVQ 103


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