BLASTX nr result

ID: Atractylodes22_contig00025039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025039
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...   192   1e-46
ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing pr...   192   1e-46
gb|AFK37631.1| unknown [Medicago truncatula]                          191   3e-46
ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medi...   191   3e-46
emb|CBI31756.3| unnamed protein product [Vitis vinifera]              187   4e-45

>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
           protein 1-like [Cucumis sativus]
          Length = 364

 Score =  192 bits (487), Expect = 1e-46
 Identities = 117/245 (47%), Positives = 153/245 (62%)
 Frame = +3

Query: 93  RIPRDTVRKAVISLLKWKKKQISDQKTTVSGDVDNFIYLLLTLKKIPHKNFTTTPKKIPL 272
           ++ R+T  KAV SLL+W+    S ++     D ++F+YL++TLKKIP K   T P KIPL
Sbjct: 11  KVRRETAAKAVESLLQWRN---SKREKPQLFDQEDFLYLIVTLKKIPPKG-RTNPYKIPL 66

Query: 273 PHSLHTSPESSPSCLIIDDRPKPNSQKLTFEFADKKIKSLGLPITKIXXXXXXXXDYRSF 452
           PHSLH+  +SS  CLIIDDR K N   LT + A KKI+S  +PI+K+        DYR F
Sbjct: 67  PHSLHS--DSSELCLIIDDRTKSN---LTKDDARKKIQSENIPISKVIKLSKLKSDYRPF 121

Query: 453 ESKIELFNSFDVFLADRRIVEMLPKILGKVFYXXXXXIPVPVELRRDGDWKEEIEMGFCS 632
           E+K +L +S+D+F AD R++ +LP +LGK FY     IPVP+ LR   +WKE++E    S
Sbjct: 122 EAKRKLCDSYDMFFADDRVIPLLPSLLGKHFY-KKKKIPVPLNLRHK-NWKEQVERSCSS 179

Query: 633 GLLWLSKGTCSVVKVGRFETMEVEEIVDNXXXXXXXXXXXXXXXXXXXXSFHLKFFDSLA 812
           GLL+L  GTCSVVKV R  +MEVEEIVDN                    SF LK  +S+A
Sbjct: 180 GLLYLRTGTCSVVKVAR-TSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFXLKVLESIA 238

Query: 813 LPIYQ 827
           LPIYQ
Sbjct: 239 LPIYQ 243


>ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing protein 1-like isoform 1
           [Cucumis sativus] gi|449452342|ref|XP_004143918.1|
           PREDICTED: ribosomal L1 domain-containing protein 1-like
           isoform 2 [Cucumis sativus]
          Length = 364

 Score =  192 bits (487), Expect = 1e-46
 Identities = 117/245 (47%), Positives = 153/245 (62%)
 Frame = +3

Query: 93  RIPRDTVRKAVISLLKWKKKQISDQKTTVSGDVDNFIYLLLTLKKIPHKNFTTTPKKIPL 272
           ++ R+T  KAV SLL+W+    S ++     D ++F+YL++TLKKIP K   T P KIPL
Sbjct: 11  KVRRETAAKAVESLLQWRN---SKREKPQLFDQEDFLYLIVTLKKIPPKG-RTNPYKIPL 66

Query: 273 PHSLHTSPESSPSCLIIDDRPKPNSQKLTFEFADKKIKSLGLPITKIXXXXXXXXDYRSF 452
           PHSLH+  +SS  CLIIDDR K N   LT + A KKI+S  +PI+K+        DYR F
Sbjct: 67  PHSLHS--DSSELCLIIDDRTKSN---LTKDDARKKIQSENIPISKVIKLSKLKSDYRPF 121

Query: 453 ESKIELFNSFDVFLADRRIVEMLPKILGKVFYXXXXXIPVPVELRRDGDWKEEIEMGFCS 632
           E+K +L +S+D+F AD R++ +LP +LGK FY     IPVP+ LR   +WKE++E    S
Sbjct: 122 EAKRKLCDSYDMFFADDRVIPLLPSLLGKHFY-KKKKIPVPLNLRHK-NWKEQVERSCSS 179

Query: 633 GLLWLSKGTCSVVKVGRFETMEVEEIVDNXXXXXXXXXXXXXXXXXXXXSFHLKFFDSLA 812
           GLL+L  GTCSVVKV R  +MEVEEIVDN                    SF LK  +S+A
Sbjct: 180 GLLYLRTGTCSVVKVAR-TSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIA 238

Query: 813 LPIYQ 827
           LPIYQ
Sbjct: 239 LPIYQ 243


>gb|AFK37631.1| unknown [Medicago truncatula]
          Length = 432

 Score =  191 bits (485), Expect = 3e-46
 Identities = 118/264 (44%), Positives = 160/264 (60%), Gaps = 4/264 (1%)
 Frame = +3

Query: 105 DTVRKAVISLLKWKKKQISDQKTTVSGDVDNFIYLLLTLKKIPHKNFTTTPKKIPLPHSL 284
           DTV KAV SLLKW+K ++  +K  +  + + F+YL+LTLKKIP K     P KIP+PHSL
Sbjct: 9   DTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKG-RVNPHKIPIPHSL 67

Query: 285 HTSPESSPSCLIIDDRPKPNSQKLTFEFADKKIKSLGLPITKIXXXXXXXXDYRSFESKI 464
            ++  +S  CLIIDDR    S ++T + A KK++S  +PI+KI        DYR FE+K 
Sbjct: 68  ISA--ASEQCLIIDDRANKPS-RITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 465 ELFNSFDVFLADRRIVEMLPKILGKVFYXXXXXIPVPVELRRDGDWKEEIEMGFCSGLLW 644
           +L NS+D+F AD+ IV +LP++LGK F+     IPV V+L++  +WKE+IE    S LL+
Sbjct: 125 KLCNSYDLFFADKAIVPLLPRLLGKQFF-KKRKIPVQVDLQKK-NWKEQIEKACSSALLF 182

Query: 645 LSKGTCSVVKVGRFETMEVEEIVDNXXXXXXXXXXXXXXXXXXXXSFHLKFFDSLALPIY 824
           L  GTCSVVKV +  +ME +EIV+N                    SFH+K  +SLALP+Y
Sbjct: 183 LRTGTCSVVKVAKL-SMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVY 241

Query: 825 QIDQKVEKDGNGV----TK*VKDE 884
           Q    V     GV     K VKDE
Sbjct: 242 QAVPDVRLKIEGVKDLEDKLVKDE 265


>ref|XP_003595972.1| Ribosomal L1 domain-containing protein [Medicago truncatula]
           gi|355485020|gb|AES66223.1| Ribosomal L1
           domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  191 bits (485), Expect = 3e-46
 Identities = 118/264 (44%), Positives = 160/264 (60%), Gaps = 4/264 (1%)
 Frame = +3

Query: 105 DTVRKAVISLLKWKKKQISDQKTTVSGDVDNFIYLLLTLKKIPHKNFTTTPKKIPLPHSL 284
           DTV KAV SLLKW+K ++  +K  +  + + F+YL+LTLKKIP K     P KIP+PHSL
Sbjct: 9   DTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKG-RVNPHKIPIPHSL 67

Query: 285 HTSPESSPSCLIIDDRPKPNSQKLTFEFADKKIKSLGLPITKIXXXXXXXXDYRSFESKI 464
            ++  +S  CLIIDDR    S ++T + A KK++S  +PI+KI        DYR FE+K 
Sbjct: 68  ISA--ASEQCLIIDDRANKPS-RITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKR 124

Query: 465 ELFNSFDVFLADRRIVEMLPKILGKVFYXXXXXIPVPVELRRDGDWKEEIEMGFCSGLLW 644
           +L NS+D+F AD+ IV +LP++LGK F+     IPV V+L++  +WKE+IE    S LL+
Sbjct: 125 KLCNSYDLFFADKAIVPLLPRLLGKQFF-KKRKIPVQVDLQKK-NWKEQIEKACSSALLF 182

Query: 645 LSKGTCSVVKVGRFETMEVEEIVDNXXXXXXXXXXXXXXXXXXXXSFHLKFFDSLALPIY 824
           L  GTCSVVKV +  +ME +EIV+N                    SFH+K  +SLALP+Y
Sbjct: 183 LRTGTCSVVKVAKL-SMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVY 241

Query: 825 QIDQKVEKDGNGV----TK*VKDE 884
           Q    V     GV     K VKDE
Sbjct: 242 QAVPDVRLKIEGVKDLEDKLVKDE 265


>emb|CBI31756.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  187 bits (475), Expect = 4e-45
 Identities = 113/260 (43%), Positives = 157/260 (60%), Gaps = 3/260 (1%)
 Frame = +3

Query: 84  SKQRIPRDTVRKAVISLLKWKKKQISDQKTTV-SGDVDNFIYLLLTLKKIPHKNFTTTPK 260
           S   +  +T+ KA  +LLKW+  + + QK  + + D D FIYL+LTLKKIP K   T P 
Sbjct: 19  SPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKG-RTNPH 77

Query: 261 KIPLPHSLHTSPESSPSCLIIDDRPKPNSQKLTFEFADKKIKSLGLPITKIXXXXXXXXD 440
           KIPLPH LHT P S   CLI+DDRP  +   LT + A  K+KS  +P++K+        +
Sbjct: 78  KIPLPHPLHTPPNSE-LCLIVDDRPNSH---LTSQAAKTKVKSENIPVSKVLSLSKLKSN 133

Query: 441 YRSFESKIELFNSFDVFLADRRIVEMLPKILGKVFYXXXXXIPVPVELRRDGDWKEEIEM 620
           +R FE+K +L +S+D FLAD+RIV +LPK+LGK F+     IPV V+L    +WKE+I+ 
Sbjct: 134 FRPFEAKRKLCDSYDFFLADKRIVPLLPKLLGKHFF-KKRKIPVAVDLGHK-NWKEQIDR 191

Query: 621 GFCSGLLWLSKGTCSVVKVGRFETMEVEEIVDNXXXXXXXXXXXXXXXXXXXXSFHLKFF 800
              S LL+L  GTCSVV+VG+  +ME E+IV+N                    S HLK  
Sbjct: 192 ACGSALLYLRTGTCSVVRVGKL-SMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLL 250

Query: 801 DSLALPIYQI--DQKVEKDG 854
           +SLALP+YQ   D +++ +G
Sbjct: 251 ESLALPVYQAVPDMRLKIEG 270


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