BLASTX nr result

ID: Atractylodes22_contig00025016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025016
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172217.1| proliferating cellular nuclear antigen 1 [Arabi...   211   5e-53
pdb|2ZVV|A Chain A, Crystal Structure Of Proliferating Cellular ...   211   5e-53
sp|Q43124.1|PCNA_BRANA RecName: Full=Proliferating cell nuclear ...   211   6e-53
gb|ABK26636.1| unknown [Picea sitchensis]                             210   8e-53
gb|AAF40018.1|AF083220_1 proliferating cellular nuclear antigen ...   209   1e-52

>ref|NP_172217.1| proliferating cellular nuclear antigen 1 [Arabidopsis thaliana]
           gi|297843524|ref|XP_002889643.1| hypothetical protein
           ARALYDRAFT_887948 [Arabidopsis lyrata subsp. lyrata]
           gi|13124422|sp|Q9M7Q7.2|PCNA1_ARATH RecName:
           Full=Proliferating cellular nuclear antigen 1;
           Short=PCNA 1 gi|8778558|gb|AAF79566.1|AC022464_24
           F22G5.29 [Arabidopsis thaliana]
           gi|18087559|gb|AAL58911.1|AF462821_1 At1g07370/F22G5_23
           [Arabidopsis thaliana] gi|20466115|gb|AAM19979.1|
           At1g07370/F22G5_23 [Arabidopsis thaliana]
           gi|21555621|gb|AAM63900.1| Proliferating cellular
           nuclear antigen 1 (PCNA 1) [Arabidopsis thaliana]
           gi|297335485|gb|EFH65902.1| hypothetical protein
           ARALYDRAFT_887948 [Arabidopsis lyrata subsp. lyrata]
           gi|332189994|gb|AEE28115.1| proliferating cellular
           nuclear antigen 1 [Arabidopsis thaliana]
          Length = 263

 Score =  211 bits (537), Expect = 5e-53
 Identities = 103/111 (92%), Positives = 109/111 (98%)
 Frame = +2

Query: 62  MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 241
           MLELRLVQGSLLKKV+ESIKDLVNDANFDCS++GFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 242 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKI 394
           RCDRNLSMGMNLGNM+KML+CAGNDDI+TIKADDGGD VTFMFESP QDKI
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKI 111


>pdb|2ZVV|A Chain A, Crystal Structure Of Proliferating Cellular Nuclear
           Antigen 1 And Short Peptide From Human P21
           gi|238828097|pdb|2ZVV|B Chain B, Crystal Structure Of
           Proliferating Cellular Nuclear Antigen 1 And Short
           Peptide From Human P21
          Length = 276

 Score =  211 bits (537), Expect = 5e-53
 Identities = 103/111 (92%), Positives = 109/111 (98%)
 Frame = +2

Query: 62  MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 241
           MLELRLVQGSLLKKV+ESIKDLVNDANFDCS++GFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 21  MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 80

Query: 242 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKI 394
           RCDRNLSMGMNLGNM+KML+CAGNDDI+TIKADDGGD VTFMFESP QDKI
Sbjct: 81  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKI 131


>sp|Q43124.1|PCNA_BRANA RecName: Full=Proliferating cell nuclear antigen; Short=PCNA
           gi|408232|gb|AAB27811.1| PCNA [Brassica napus]
          Length = 263

 Score =  211 bits (536), Expect = 6e-53
 Identities = 103/111 (92%), Positives = 108/111 (97%)
 Frame = +2

Query: 62  MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 241
           MLELRLVQGSLLKKV+ESIKDLVNDANFDCS +GFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 242 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKI 394
           RCDRNLSMGMNLGNM+KML+CAGNDDI+TIKADDGGD VTFMFESP QDKI
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPKQDKI 111


>gb|ABK26636.1| unknown [Picea sitchensis]
          Length = 261

 Score =  210 bits (535), Expect = 8e-53
 Identities = 103/111 (92%), Positives = 108/111 (97%)
 Frame = +2

Query: 62  MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 241
           MLELRLVQGSLLKKV+ESIKDLV DANFDCSA+GFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVTDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 242 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKI 394
           RCDRN+SMGMNL NMAKML+CAGNDDI+TIKADDGGD VTFMFESPNQDKI
Sbjct: 61  RCDRNMSMGMNLNNMAKMLKCAGNDDIITIKADDGGDTVTFMFESPNQDKI 111


>gb|AAF40018.1|AF083220_1 proliferating cellular nuclear antigen [Arabidopsis thaliana]
           gi|155675855|gb|ABU25233.1| proliferating cell nuclear
           antigen 1 [Arabidopsis thaliana]
          Length = 263

 Score =  209 bits (533), Expect = 1e-52
 Identities = 102/111 (91%), Positives = 108/111 (97%)
 Frame = +2

Query: 62  MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 241
           MLELRLVQGSLLKKV+ESIKDLVNDANFDCS++GFSLQAMDSSHVAL SLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALASLLLRSEGFEHY 60

Query: 242 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKI 394
           RCDRNLSMGMNLGNM+KML+CAGNDDI+TIKADDGGD VTFMFESP QDKI
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKI 111


Top