BLASTX nr result

ID: Atractylodes22_contig00025013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025013
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   259   5e-67
ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   259   5e-67
gb|ADB24771.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirs...   254   2e-65
ref|XP_002320057.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...   248   1e-63

>ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 432

 Score =  259 bits (663), Expect = 5e-67
 Identities = 135/186 (72%), Positives = 145/186 (77%)
 Frame = -2

Query: 558 SHMDNIPSTPGKFKMEKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXXXX 379
           SH+DNIPSTPGKFKM+KSPYIHR RWH SSL KLTFWS           F+         
Sbjct: 2   SHLDNIPSTPGKFKMDKSPYIHRLRWH-SSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 378 XXXXXXXXXXXSLKTSSWGGLAWEKRVRSSARIRSRNGFSVLVTGAAGFVGTHVSVALKR 199
                       L T  WGG AWEKRVRSSAR+RSRNG SVLVTGAAGFVGTHVSVALKR
Sbjct: 61  DHSRRS------LSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKR 114

Query: 198 RGDGVLGLDNFNDYYDPSLKRARQALLERSGIYIVEGDINDAALLKKLFEVVPFTHVMHL 19
           RGDGVLGLDNFN+YYD SLKRARQALLER+G+++VEGDIND+ALLKKLFEVVPFTHVMHL
Sbjct: 115 RGDGVLGLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHL 174

Query: 18  AAQAGV 1
           AAQAGV
Sbjct: 175 AAQAGV 180


>ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 438

 Score =  259 bits (663), Expect = 5e-67
 Identities = 135/186 (72%), Positives = 145/186 (77%)
 Frame = -2

Query: 558 SHMDNIPSTPGKFKMEKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXXXX 379
           SH+DNIPSTPGKFKM+KSPYIHR RWH SSL KLTFWS           F+         
Sbjct: 8   SHLDNIPSTPGKFKMDKSPYIHRLRWH-SSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 66

Query: 378 XXXXXXXXXXXSLKTSSWGGLAWEKRVRSSARIRSRNGFSVLVTGAAGFVGTHVSVALKR 199
                       L T  WGG AWEKRVRSSAR+RSRNG SVLVTGAAGFVGTHVSVALKR
Sbjct: 67  DHSRRS------LSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKR 120

Query: 198 RGDGVLGLDNFNDYYDPSLKRARQALLERSGIYIVEGDINDAALLKKLFEVVPFTHVMHL 19
           RGDGVLGLDNFN+YYD SLKRARQALLER+G+++VEGDIND+ALLKKLFEVVPFTHVMHL
Sbjct: 121 RGDGVLGLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHL 180

Query: 18  AAQAGV 1
           AAQAGV
Sbjct: 181 AAQAGV 186


>gb|ADB24771.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]
          Length = 435

 Score =  254 bits (649), Expect = 2e-65
 Identities = 135/188 (71%), Positives = 147/188 (78%), Gaps = 2/188 (1%)
 Frame = -2

Query: 558 SHMDNIPSTPGKFKMEKSPYIH-RFRWHY-SSLAKLTFWSXXXXXXXXXXXFKXXXXXXX 385
           SH+D+IPSTPGKFKMEKSP+IH R RWH+ SSLAKLTFWS           F+       
Sbjct: 2   SHLDDIPSTPGKFKMEKSPFIHSRMRWHWQSSLAKLTFWSIVFFCLILIFFFRSPSSNPL 61

Query: 384 XXXXXXXXXXXXXSLKTSSWGGLAWEKRVRSSARIRSRNGFSVLVTGAAGFVGTHVSVAL 205
                         L+T +WGG AWEKRVRSSAR+RSRNGFSVLVTGAAGFVGTHVS AL
Sbjct: 62  LQDPYRRS------LRTYNWGGPAWEKRVRSSARVRSRNGFSVLVTGAAGFVGTHVSSAL 115

Query: 204 KRRGDGVLGLDNFNDYYDPSLKRARQALLERSGIYIVEGDINDAALLKKLFEVVPFTHVM 25
           K+RGDGVLGLDNFNDYYDPSLKRARQ LLERSG++IVEGDIND+ALL KLFEVV FTHVM
Sbjct: 116 KKRGDGVLGLDNFNDYYDPSLKRARQELLERSGVFIVEGDINDSALLMKLFEVVAFTHVM 175

Query: 24  HLAAQAGV 1
           HLAAQAGV
Sbjct: 176 HLAAQAGV 183


>ref|XP_002320057.1| predicted protein [Populus trichocarpa] gi|222860830|gb|EEE98372.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  251 bits (641), Expect = 2e-64
 Identities = 130/186 (69%), Positives = 144/186 (77%)
 Frame = -2

Query: 558 SHMDNIPSTPGKFKMEKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXXXXXXXX 379
           SH+D+ PSTPGKFKM+KSPY  R RWH SS+AKLT WS           ++         
Sbjct: 2   SHLDHTPSTPGKFKMDKSPYYSRTRWH-SSVAKLTIWSFLFIAVIFVFFYRSPPSSSNSD 60

Query: 378 XXXXXXXXXXXSLKTSSWGGLAWEKRVRSSARIRSRNGFSVLVTGAAGFVGTHVSVALKR 199
                       L +++WGG AWEKRVR+SARIRSRNGFSVLVTGAAGFVGTHVS ALKR
Sbjct: 61  LSRRY-------LTSATWGGAAWEKRVRTSARIRSRNGFSVLVTGAAGFVGTHVSSALKR 113

Query: 198 RGDGVLGLDNFNDYYDPSLKRARQALLERSGIYIVEGDINDAALLKKLFEVVPFTHVMHL 19
           RGDGVLGLDNFNDYYDP+LKRARQALLERSG++IVEGDIND +LLKKLFEVVPFTHVMHL
Sbjct: 114 RGDGVLGLDNFNDYYDPTLKRARQALLERSGVFIVEGDINDVSLLKKLFEVVPFTHVMHL 173

Query: 18  AAQAGV 1
           AAQAGV
Sbjct: 174 AAQAGV 179


>ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318808|gb|EFH49230.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score =  248 bits (634), Expect = 1e-63
 Identities = 134/192 (69%), Positives = 145/192 (75%)
 Frame = -2

Query: 576 MKQMPSSHMDNIPSTPGKFKMEKSPYIHRFRWHYSSLAKLTFWSXXXXXXXXXXXFKXXX 397
           MKQM  SH+D+IPSTPGKFK    PY HR RW  SS+AKL FWS           ++   
Sbjct: 1   MKQM--SHLDDIPSTPGKFK----PYFHRTRWQ-SSVAKLAFWSLVFVGLIFIFFYRSPV 53

Query: 396 XXXXXXXXXXXXXXXXXSLKTSSWGGLAWEKRVRSSARIRSRNGFSVLVTGAAGFVGTHV 217
                             L+T SWGG AWEKRVRSSAR+R+R GFSVLVTGAAGFVGTHV
Sbjct: 54  SSNPDPSRRS--------LRTYSWGGPAWEKRVRSSARVRTRRGFSVLVTGAAGFVGTHV 105

Query: 216 SVALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGIYIVEGDINDAALLKKLFEVVPF 37
           S ALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSG+++VEGDINDAALLKKLFEVVPF
Sbjct: 106 SAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPF 165

Query: 36  THVMHLAAQAGV 1
           THVMHLAAQAGV
Sbjct: 166 THVMHLAAQAGV 177


Top