BLASTX nr result

ID: Atractylodes22_contig00024469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024469
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD51364.1| D3-type cyclin [Malus x domestica]                     357   3e-96
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]                       349   9e-94
ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   349   9e-94
ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|3...   348   2e-93
ref|XP_002326955.1| predicted protein [Populus trichocarpa] gi|1...   346   6e-93

>gb|ADD51364.1| D3-type cyclin [Malus x domestica]
          Length = 376

 Score =  357 bits (916), Expect = 3e-96
 Identities = 193/341 (56%), Positives = 252/341 (73%), Gaps = 18/341 (5%)
 Frame = +2

Query: 119  LLDSLYCEEKHQWEEE-------DDDQEPVSSYTTCVDNENNIHTHTLFQQDLFWEDQEL 277
            LLD+LYC E H   E+        +++    S+ + V + N I    L +QDLFW+++EL
Sbjct: 21   LLDALYCSEVHLVGEQVSPVDYFPEEELVEDSFNSNVSSFNPIKAPILVEQDLFWDNEEL 80

Query: 278  SSLISKESQQ-------QLQNNRPGPWGNHRREAVEWILGVVSHFSFTALTAVLSVNYLD 436
             SL+SKES+Q       Q+  +  G     RREAV+W+L V SH+SF+ALTAVL+ +Y D
Sbjct: 81   ISLLSKESEQNELQKPLQISPSLAGA----RREAVDWMLRVASHYSFSALTAVLAADYFD 136

Query: 437  RFLDGLEREKKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKM 616
            RFL  L+ + +K  PWMTQLAAV+C+SLAAKVEET VPLLLD Q+E SKYVFEA+TI++M
Sbjct: 137  RFLSSLQLQVEK--PWMTQLAAVACISLAAKVEETQVPLLLDFQVEDSKYVFEARTIKRM 194

Query: 617  EVLILSTLEWKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLP 796
            E+L+LSTL+W+MNPVTP+SF+DYITRRLGL+++L  E LKRCE +LL  + D RF  +LP
Sbjct: 195  EILVLSTLQWRMNPVTPISFIDYITRRLGLKNHLCWEVLKRCELILLNLISDSRFMYFLP 254

Query: 797  SVIATATMVHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCS--RNGGRHF 970
            SV+ATATM+HV+ ++EPC+ IEYQ+QLLGILGINK++V +C K I E+T S     G+  
Sbjct: 255  SVVATATMLHVVKNMEPCLLIEYQTQLLGILGINKDKVDDCCKLISELTSSGGNGSGKQS 314

Query: 971  NKRKFGAVPGSPNAVMDLSFSSDES-CSVVTGSN-PSSPEP 1087
            NKRKFG+VPGSP+ VMD+SFSSD S  S  TGS+  SSPEP
Sbjct: 315  NKRKFGSVPGSPSGVMDVSFSSDSSNDSWATGSSVSSSPEP 355


>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
          Length = 371

 Score =  349 bits (895), Expect = 9e-94
 Identities = 191/337 (56%), Positives = 246/337 (72%), Gaps = 14/337 (4%)
 Frame = +2

Query: 119  LLDSLYCEEKH----QWEEEDDDQEPVSSYTTCVDNENNIHTHTLFQQDLFWEDQELSSL 286
            +LD+LYC+E+H    + E+  D +E    Y+   DN  +     L +QDLFWED+EL+SL
Sbjct: 22   VLDALYCQEQHLEGGETEDYFDSEEEDCHYS---DNIVSPKPPQLLEQDLFWEDEELTSL 78

Query: 287  ISKESQQQLQNN--RPGPWGNHRREAVEWILGVVSHFSFTALTAVLSVNYLDRFLDGLER 460
            +SKE +  L ++       G  RR AVEW+L V +H+SF+ALTAVL+VNYLDRFL     
Sbjct: 79   LSKEQENPLFHSLETDPSLGGARRAAVEWLLKVNAHYSFSALTAVLAVNYLDRFLFSFHF 138

Query: 461  EKKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTL 640
            +++K  PWMTQLAAV+CLSLAAKVEET VPLLLDLQ+E S+YVFEAKTIQ+ME+LILSTL
Sbjct: 139  QREK--PWMTQLAAVACLSLAAKVEETEVPLLLDLQVEDSRYVFEAKTIQRMEMLILSTL 196

Query: 641  EWKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVIATATM 820
            +WKMNPVTPLSFLD+ITRRLGL++ L  EFLKRCE +LLC + D RF  YLPSV++TATM
Sbjct: 197  QWKMNPVTPLSFLDHITRRLGLKNRLCCEFLKRCESILLCIISDSRFMLYLPSVLSTATM 256

Query: 821  VHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVPG 1000
            + V +S+EPC+ +EYQ+QLLGIL I+K++V +C+K + E   S +G    NKRKF ++PG
Sbjct: 257  LLVFSSLEPCLAVEYQNQLLGILQIDKDKVEDCYKLMLE---STSGIHQSNKRKFRSMPG 313

Query: 1001 SPNAVMDLSFSSDE--------SCSVVTGSNPSSPEP 1087
            SPN V D+ FSSD         S +  + S  SSPEP
Sbjct: 314  SPNCVTDVCFSSDSSNDSWAVTSSASASASVCSSPEP 350


>ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|355492139|gb|AES73342.1| Cyclin
            D3-1 [Medicago truncatula] gi|388511523|gb|AFK43823.1|
            unknown [Medicago truncatula]
          Length = 348

 Score =  349 bits (895), Expect = 9e-94
 Identities = 192/333 (57%), Positives = 245/333 (73%), Gaps = 10/333 (3%)
 Frame = +2

Query: 119  LLDSLYCEEKHQWEEEDD-DQEPVSSYTTCVDNENNIHTHTLFQQDLFWEDQELSSLISK 295
            LLD+LYC E+H WEE+D+ + + VS   T +    N  T +L + D+FWED+EL SL++K
Sbjct: 11   LLDTLYCSEEH-WEEQDELEYDNVSLNNTTI----NTTTCSLLETDMFWEDEELKSLLNK 65

Query: 296  ESQQQL----QNNRPGPWGNHRREAVEWILGVVSHFSFTALTAVLSVNYLDRFLDGLERE 463
            E Q  L    Q N        RRE++EWIL V +H+SF+ALT+VL+VNYLDRFL     +
Sbjct: 66   EQQNPLYIFLQTNPV--LETARRESIEWILKVNAHYSFSALTSVLAVNYLDRFLFSFRFQ 123

Query: 464  KKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTLE 643
             +K  PWMTQLAAV+CLSLAAK+EETHVPLLLDLQ+E S+Y+FEAKTI+KME+LILSTL 
Sbjct: 124  NEK--PWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLG 181

Query: 644  WKMNPVTPLSFLDYITRRLGLRSYLSS-EFLKRCECLLLCFL-PDGRFKCYLPSVIATAT 817
            WKMNP TPLSF+D+I RRLGL+ +L   EFLKRCE +LL  +  D +F  YLPSV+ATAT
Sbjct: 182  WKMNPATPLSFIDFIIRRLGLKDHLICWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATAT 241

Query: 818  MVHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVP 997
            MVHV NSVEP +G EYQ+QLLGILGINK++V EC K + ++      G   NKRKFG++P
Sbjct: 242  MVHVFNSVEPSLGDEYQTQLLGILGINKDKVDECGKLLLKLWSGYEEGNECNKRKFGSIP 301

Query: 998  GSPNAVMDLSFS---SDESCSVVTGSNPSSPEP 1087
             SP  VM++SFS   S++S +++  S  SSPEP
Sbjct: 302  SSPKGVMEMSFSCDNSNDSWAIIAASVSSSPEP 334


>ref|XP_002285001.1| PREDICTED: cyclin-D3-1 [Vitis vinifera] gi|302142269|emb|CBI19472.3|
            unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  348 bits (892), Expect = 2e-93
 Identities = 198/336 (58%), Positives = 243/336 (72%), Gaps = 14/336 (4%)
 Frame = +2

Query: 119  LLDSLYCEEKHQWEEED------DDQEPVSSYTTCVDNENNIHTHTLFQQDLFWEDQELS 280
            LLD+LYCEE H WEEE       +++E  S Y+    + +  +   L + DL  ED+EL 
Sbjct: 19   LLDTLYCEENH-WEEEVREEGFLEEEEEESYYS----DGSKPNAPPLLEPDLLCEDEELV 73

Query: 281  SLISKESQQQLQNNRPGPWGNH-----RREAVEWILGVVSHFSFTALTAVLSVNYLDRFL 445
            SL SKE +  L +N   P  N      R EAVEW+L V +H+SF+ALTAVL+VNY DRFL
Sbjct: 74   SLFSKEEKNDLHSN---PESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYFDRFL 130

Query: 446  DGLEREKKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVL 625
               + + +K  PWMTQLAAV+CLSLAAKVEET VPLLLDLQ+E + YVFEAKTIQ+ME++
Sbjct: 131  FSCDVQGEK--PWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIM 188

Query: 626  ILSTLEWKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVI 805
            +LSTL WKMNPVTPLSFLDYITRRLGL+++L  EFLKRCE LLL  L D RF CYLPSVI
Sbjct: 189  VLSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVI 248

Query: 806  ATATMVHVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKF 985
            ATA M+HVI+SVEPCI ++YQSQLLGILGI+K++V +C + I +I  S     H NKRKF
Sbjct: 249  ATAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSAR-CHHHNKRKF 307

Query: 986  GAVPGSPNAVMDLSF---SSDESCSVVTGSNPSSPE 1084
             + PGSPN VMD  F   SS++S +V   S+PSS E
Sbjct: 308  ASTPGSPNGVMDGWFSCDSSNDSWAVAVSSSPSSSE 343


>ref|XP_002326955.1| predicted protein [Populus trichocarpa] gi|159025711|emb|CAN88856.1|
            D3-type cyclin [Populus trichocarpa]
            gi|222835270|gb|EEE73705.1| predicted protein [Populus
            trichocarpa]
          Length = 379

 Score =  346 bits (888), Expect = 6e-93
 Identities = 192/330 (58%), Positives = 240/330 (72%), Gaps = 7/330 (2%)
 Frame = +2

Query: 119  LLDSLYCEEKHQWEE--EDDDQEPVSSYTTCVDNENNIHTHTLF-QQDLFWEDQELSSLI 289
            L D+LYC E++  EE  ED  Q+ +   + C +N N ++T  +F +QDL WED+ELSSL 
Sbjct: 25   LYDALYCSEENWVEEVREDCFQDELEGESYCSNNSNKLNTFPIFLEQDLSWEDEELSSLF 84

Query: 290  SKESQQQL-QNNRPGP-WGNHRREAVEWILGVVSHFSFTALTAVLSVNYLDRFLDGLERE 463
            +KE Q QL ++    P     R EAVEWIL V  H+SFTALTAVL+VNYLDRFL  +  +
Sbjct: 85   AKEEQNQLCKDLETNPSLARARCEAVEWILKVNEHYSFTALTAVLAVNYLDRFLFSVHLQ 144

Query: 464  KKKKQPWMTQLAAVSCLSLAAKVEETHVPLLLDLQMEGSKYVFEAKTIQKMEVLILSTLE 643
            K+K  PWM QLAAVSCLSLAAKVEET VPLLLD Q+E SKYVFEAKTIQ+ME+L+LSTL+
Sbjct: 145  KEK--PWMAQLAAVSCLSLAAKVEETQVPLLLDFQVEDSKYVFEAKTIQRMEILVLSTLK 202

Query: 644  WKMNPVTPLSFLDYITRRLGLRSYLSSEFLKRCECLLLCFLPDGRFKCYLPSVIATATMV 823
            WKMNPVTP+SFLDYITRRLGL  YL  EFLKRCE ++L  L D R   Y+PSV+A ATM+
Sbjct: 203  WKMNPVTPISFLDYITRRLGLEHYLCLEFLKRCERMVLSILADSRSMPYVPSVMAAATML 262

Query: 824  HVINSVEPCIGIEYQSQLLGILGINKEEVMECWKQIQEITCSRNGGRHFNKRKFGAVPGS 1003
            +VI+++EP +  EYQSQLL ILGI+K++V +C K + E     +     NKRKF ++PGS
Sbjct: 263  YVIDNIEPSLAAEYQSQLLSILGIDKDKVEDCSKFLMEFALRYHFKLLSNKRKFCSLPGS 322

Query: 1004 PNAVMDLSFSSDESCS--VVTGSNPSSPEP 1087
            P+ V+D+SFSSD S     V  S  SSP+P
Sbjct: 323  PSGVVDVSFSSDSSNDSWSVASSVSSSPKP 352


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