BLASTX nr result

ID: Atractylodes22_contig00024136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024136
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               105   5e-21
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    89   5e-16
ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group] g...    62   6e-08
ref|XP_004135791.1| PREDICTED: uncharacterized protein LOC101211...    57   2e-06
emb|CAN65233.1| hypothetical protein VITISV_022975 [Vitis vinifera]    55   6e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 QDPRSQKVIGTGRRLGELYVLDELKV-YDVAASSVDLSSFRLGRSSSDFYPWHSRLGHVS 66
           QD +SQK+IGTGRR   LY+LDELKV   VAA++VDLS FRL  SSS FY WHSRLGHVS
Sbjct: 430 QDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVS 489

Query: 65  ASRLQILASTGTLGHLNTYDI 3
           +SRL+ LASTG LG+L T DI
Sbjct: 490 SSRLRFLASTGALGNLKTCDI 510


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
 Frame = -2

Query: 236 PRSQKVIGTGRRLGELYVLDELK---VYDVAASSVDLSSFRLGRSSSDFYPWHSRLGHVS 66
           P SQ +IG GRR   LYV+DEL+   V ++AA SVDLSSF L  SSS FY WHSRLGH+S
Sbjct: 330 PXSQXLIGXGRRQEGLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHIS 389

Query: 65  ASRLQILASTGTLGHLNTYDI 3
           A  L+ L S G LG+  T+DI
Sbjct: 390 APHLKYLISKGFLGNFQTHDI 410


>ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group]
           gi|255677175|dbj|BAH93597.1| Os06g0583500, partial
           [Oryza sativa Japonica Group]
          Length = 174

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
 Frame = -2

Query: 242 QDPRSQKVIGTGRRL----GELYVLDELKVYDVAASSVDLSSFRLGRSSSDFYP-WHSRL 78
           QD +++ ++GTG R     G+LYVLD L +   +  S   SS  LG +SS  +P WH RL
Sbjct: 15  QDRQTRALVGTGHRHSSSPGKLYVLDHLSLPPSSFGSTTTSSTALGYASSTTFPQWHHRL 74

Query: 77  GHVSASRLQILASTGTLGHLN 15
           GH+  SRL  L   G LGH++
Sbjct: 75  GHLCGSRLSTLIRQGVLGHVS 95


>ref|XP_004135791.1| PREDICTED: uncharacterized protein LOC101211570 [Cucumis sativus]
           gi|449442445|ref|XP_004138992.1| PREDICTED:
           uncharacterized protein LOC101222551 [Cucumis sativus]
           gi|449446153|ref|XP_004140836.1| PREDICTED:
           uncharacterized protein LOC101212068 [Cucumis sativus]
           gi|449448868|ref|XP_004142187.1| PREDICTED:
           uncharacterized protein LOC101221851 [Cucumis sativus]
           gi|449448870|ref|XP_004142188.1| PREDICTED:
           uncharacterized protein LOC101222325 [Cucumis sativus]
           gi|449460832|ref|XP_004148148.1| PREDICTED:
           uncharacterized protein LOC101214339 [Cucumis sativus]
           gi|449461011|ref|XP_004148237.1| PREDICTED:
           uncharacterized protein LOC101217769 [Cucumis sativus]
           gi|449463533|ref|XP_004149488.1| PREDICTED:
           uncharacterized protein LOC101217687 [Cucumis sativus]
           gi|449468630|ref|XP_004152024.1| PREDICTED:
           uncharacterized protein LOC101209650 [Cucumis sativus]
          Length = 529

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 45/78 (57%)
 Frame = -2

Query: 242 QDPRSQKVIGTGRRLGELYVLDELKVYDVAASSVDLSSFRLGRSSSDFYPWHSRLGHVSA 63
           QDP++ + IGTGR++G L+ L  L+V   ++ S  ++        SD Y WH RLGH S+
Sbjct: 403 QDPQTGRTIGTGRKVGRLFELTSLRVSSPSSISASVTD-------SDTYQWHLRLGHASS 455

Query: 62  SRLQILASTGTLGHLNTY 9
            +L+ L S   L +L  +
Sbjct: 456 EKLRHLISVNNLTNLTKF 473


>emb|CAN65233.1| hypothetical protein VITISV_022975 [Vitis vinifera]
          Length = 1277

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 46/76 (60%)
 Frame = -2

Query: 242 QDPRSQKVIGTGRRLGELYVLDELKVYDVAASSVDLSSFRLGRSSSDFYPWHSRLGHVSA 63
           QDPR+ + +GTG R+G ++ ++ L +  VA  SV  ++  +  S      WHSRLGH  +
Sbjct: 527 QDPRTXQELGTGPRVGRMFPVNNLHLPPVAPVSVAAATAAVS-SLPSLALWHSRLGHAPS 585

Query: 62  SRLQILASTGTLGHLN 15
           SR+Q L S G LG ++
Sbjct: 586 SRVQQLVSRGLLGSVS 601


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