BLASTX nr result
ID: Atractylodes22_contig00023821
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00023821
(510 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera] 116 9e-30
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 112 1e-28
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 110 1e-27
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 110 2e-27
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 110 2e-27
>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
Length = 1265
Score = 116 bits (291), Expect(2) = 9e-30
Identities = 66/133 (49%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Frame = -1
Query: 510 KMHKDVDGERVDATLFKQIVESLMYLTATQPD*MLVVNLISRYRSNPTHKHLAAAK---R 340
K+ KD G +VD T +KQ+V SLMYL AT+PD M VV+LISRY NPT HL AAK R
Sbjct: 1056 KLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFVVSLISRYMENPTELHLQAAKRVLR 1115
Query: 339 YIQGTVDLGVFYKRGG---------ASH***LCRSF*RWQEHLRWVIMLSGGAIAWSSRK 187
Y+QGT + G+FY++GG + H + +V +LS GAI+WSS+K
Sbjct: 1116 YLQGTTEFGIFYRKGGDDELVTYTBSDH----AGDLDERKSTSGYVFLLSSGAISWSSKK 1171
Query: 186 QPIVTLSSTEDEY 148
QPIV+LSSTE E+
Sbjct: 1172 QPIVSLSSTEAEF 1184
Score = 38.5 bits (88), Expect(2) = 9e-30
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 11/59 (18%)
Frame = -3
Query: 151 IWLRKIPN---HEQAKGAIIKCDNTSAIKLSKKSMFHG--------LSFPLRPYQRRSC 8
+WL+++ Q K II CD++SAIKLSK + HG L FP R ++ C
Sbjct: 1195 VWLKRVLGKLGQNQGKPTIIHCDSSSAIKLSKNPVMHGRSKHIDVRLPFPSRAHKGWYC 1253
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 112 bits (280), Expect(2) = 1e-28
Identities = 65/126 (51%), Positives = 84/126 (66%), Gaps = 8/126 (6%)
Frame = -1
Query: 501 KDVDGERVDATLFKQIVESLMYLTATQPD*MLVVNLISRYRSNPTHKHLAAAK---RYIQ 331
K+ DG RVD+T +K+IV SLMYLTAT PD M VV+LISR+ PT HL +AK RY++
Sbjct: 1104 KNGDGVRVDSTFYKKIVGSLMYLTATXPDVMFVVSLISRFXDCPTELHLQSAKRILRYLK 1163
Query: 330 GTVDLGVFYKRGGASH***LCRSF*RWQEHLR-----WVIMLSGGAIAWSSRKQPIVTLS 166
GT+D GVFYK+GG S R +V MLS GA++WSS+KQP+V+LS
Sbjct: 1164 GTIDFGVFYKKGGNEELIAYTDSDYAGDLDDRKSTSGYVFMLSSGAVSWSSKKQPVVSLS 1223
Query: 165 STEDEY 148
+TE E+
Sbjct: 1224 TTEAEF 1229
Score = 38.9 bits (89), Expect(2) = 1e-28
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 151 IWLRKIP---NHEQAKGAIIKCDNTSAIKLSKKSMFHG 47
IWLR+I NH Q + CDN+S IKLSK + HG
Sbjct: 1240 IWLRRILEGLNHAQHDSTTVYCDNSSTIKLSKNLVMHG 1277
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 110 bits (275), Expect(2) = 1e-27
Identities = 62/128 (48%), Positives = 83/128 (64%), Gaps = 7/128 (5%)
Frame = -1
Query: 510 KMHKDVDGERVDATLFKQIVESLMYLTATQPD*MLVVNLISRYRSNPTHKHLAAAK---R 340
K+ +D +G VD TL+KQ+V SLMYLTAT+PD M V+LISRY +PT HL AAK R
Sbjct: 852 KLTRDKEGVEVDGTLYKQMVGSLMYLTATRPDLMFSVSLISRYMEHPTESHLLAAKRILR 911
Query: 339 YIQGTVDLGVFYKRGGASH***LCRSF*RWQEHLR----WVIMLSGGAIAWSSRKQPIVT 172
Y++GTV+ GVFYK+GG S R + ++ A++WSS+KQP+VT
Sbjct: 912 YVKGTVEFGVFYKKGGDDKFIGYTDSDYAGDHDDRKSTSGYVFMNSSAVSWSSKKQPVVT 971
Query: 171 LSSTEDEY 148
LS+TE E+
Sbjct: 972 LSTTEAEF 979
Score = 37.4 bits (85), Expect(2) = 1e-27
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 151 IWLRKIP---NHEQAKGAIIKCDNTSAIKLSKKSMFHGLS 41
+WLR+I N Q +I CDN SAIKLSK + H S
Sbjct: 990 VWLRRILKSLNQVQTSPTVIYCDNVSAIKLSKNPVMHSRS 1029
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 110 bits (275), Expect(2) = 2e-27
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 8/129 (6%)
Frame = -1
Query: 510 KMHKDVDGERVDATLFKQIVESLMYLTATQPD*MLVVNLISRYRSNPTHKHLAAAK---R 340
K+ K G+ VD T FKQ++ SL YLT T+PD + VNL+SRY +P +HL A K R
Sbjct: 1099 KLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILR 1158
Query: 339 YIQGTVDLGVFYKRGGASH***LCRSF*RWQEHLR-----WVIMLSGGAIAWSSRKQPIV 175
Y+QGT+DLG+ Y+RGGA+ S R +V ML GGAIAW+S+KQPIV
Sbjct: 1159 YVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIV 1218
Query: 174 TLSSTEDEY 148
TLS+TE E+
Sbjct: 1219 TLSTTEAEF 1227
Score = 36.6 bits (83), Expect(2) = 2e-27
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 151 IWLRKIPNH---EQAKGAIIKCDNTSAIKLSKKSMFHGLS 41
+WLR + Q G ++ CDN+S IKLSK + HG S
Sbjct: 1238 VWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRS 1277
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 110 bits (275), Expect(2) = 2e-27
Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 8/129 (6%)
Frame = -1
Query: 510 KMHKDVDGERVDATLFKQIVESLMYLTATQPD*MLVVNLISRYRSNPTHKHLAAAK---R 340
K+ K G+ VD T FKQ++ SL YLT T+PD + VNL+SRY +P +HL A K R
Sbjct: 1099 KLTKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILR 1158
Query: 339 YIQGTVDLGVFYKRGGASH***LCRSF*RWQEHLR-----WVIMLSGGAIAWSSRKQPIV 175
Y+QGT+DLG+ Y+RGGA+ S R +V ML GGAIAW+S+KQPIV
Sbjct: 1159 YVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIV 1218
Query: 174 TLSSTEDEY 148
TLS+TE E+
Sbjct: 1219 TLSTTEAEF 1227
Score = 36.6 bits (83), Expect(2) = 2e-27
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 151 IWLRKIPNH---EQAKGAIIKCDNTSAIKLSKKSMFHGLS 41
+WLR + Q G ++ CDN+S IKLSK + HG S
Sbjct: 1238 VWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRS 1277