BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022476
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,...   100   9e-20
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ...    97   3e-19
ref|NP_199046.1| pentatricopeptide repeat-containing protein [Ar...    99   5e-19
ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  108 bits (270), Expect = 4e-22
 Identities = 70/168 (41%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 LPPPLSTTNRFLRHRNRYPPSPQPLSSTAFYINHXXXXXXXXXXXXXXSEDDTITQ---D 327
           LPP L+TT           P P P +    + N+              +   TI +   D
Sbjct: 4   LPPQLTTT-----------PFPSPSTHRHSHHNNIHFLPPPQSSASPITAKPTILEEGPD 52

Query: 326 DVVSLYPHRRYDFSPLLQFLXXXXXXXXXXXXXXXXSLDQTELRLAESYRVVPTPLWXXX 147
           D++SL+ +RRYDF+PLL FL                 LD TE +LAESYR VP PLW   
Sbjct: 53  DILSLH-NRRYDFTPLLSFLSTTSNSSPPTS------LDSTEFQLAESYRAVPAPLWHAF 105

Query: 146 XXXXXXXXXXXXXXSIAYALVTWLQKHNLCFSYELLYSILIHALGRSE 3
                         ++AYA+V+WLQKHNLCFSYELLYSILI+ALGRSE
Sbjct: 106 LKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINALGRSE 153


>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  100 bits (250), Expect = 9e-20
 Identities = 58/111 (52%), Positives = 67/111 (60%)
 Frame = -2

Query: 335 TQDDVVSLYPHRRYDFSPLLQFLXXXXXXXXXXXXXXXXSLDQTELRLAESYRVVPTPLW 156
           T+ D+++L   RRYDF+PLL FL                 LD TE +LAESYR VP PLW
Sbjct: 63  TEQDILALQS-RRYDFTPLLNFLSNQIKASPNTSSSPTS-LDTTEFQLAESYRAVPGPLW 120

Query: 155 XXXXXXXXXXXXXXXXXSIAYALVTWLQKHNLCFSYELLYSILIHALGRSE 3
                             +AYA+V+WLQKHNLCFSYELLYSILIHALGRSE
Sbjct: 121 HSLLKSLSSSSSSIG---LAYAVVSWLQKHNLCFSYELLYSILIHALGRSE 168


>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311376|gb|EFH41800.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 711

 Score = 96.7 bits (239), Expect(2) = 3e-19
 Identities = 57/121 (47%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
 Frame = -2

Query: 344 DTITQDDVVSLYPHRRYDFSPLLQFLXXXXXXXXXXXXXXXXS-------LDQTELRLAE 186
           DT  +DD  S   HRRYDFSPLL+FL                        L+  E  L E
Sbjct: 66  DTNEEDDEFSSEVHRRYDFSPLLKFLSRFGPVELVLDSESESESEASPESLNPVEFELVE 125

Query: 185 SYRVVPTPLWXXXXXXXXXXXXXXXXXSIAYALVTWLQKHNLCFSYELLYSILIHALGRS 6
           SY  VP P W                  +AYA+V+WLQKHNLCFSYELLYSILIHALGRS
Sbjct: 126 SYSAVPAPYWHSLIKSLCSSTSSLG---LAYAVVSWLQKHNLCFSYELLYSILIHALGRS 182

Query: 5   E 3
           E
Sbjct: 183 E 183



 Score = 23.1 bits (48), Expect(2) = 3e-19
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = -3

Query: 442 HHRHNLFLLPP---FTSTTHLSV 383
           HH H+ F  PP   F++TT  S+
Sbjct: 26  HHHHHRFFQPPISAFSATTSASL 48


>ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154282|sp|Q8L844.1|PP413_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
           gi|21539517|gb|AAM53311.1| maize crp1 protein-like
           [Arabidopsis thaliana] gi|332007411|gb|AED94794.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 709

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 66/168 (39%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
 Frame = -2

Query: 491 PPLSTTNRFLRHRNRYPPSPQPLSSTAFYINHXXXXXXXXXXXXXXSEDDTITQDDVVSL 312
           PP+S    F    +   PSP P SS++++ +                 D    +D+  S 
Sbjct: 33  PPISA---FSATTSASLPSPSPSSSSSYFSSWNGL-------------DTNEEEDNEFSS 76

Query: 311 YPHRRYDFSPLLQFLXXXXXXXXXXXXXXXXS-----LDQTELRLAESYRVVPTPLWXXX 147
             HRRYDFSPLL+FL                      L+  E  L ESYR VP P W   
Sbjct: 77  EVHRRYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVEFDLVESYRAVPAPYWHSL 136

Query: 146 XXXXXXXXXXXXXXSIAYALVTWLQKHNLCFSYELLYSILIHALGRSE 3
                          +AYA+V+WLQKHNLCFSYELLYSILIHALGRSE
Sbjct: 137 IKSLTSSTSSLG---LAYAVVSWLQKHNLCFSYELLYSILIHALGRSE 181


>ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|222856421|gb|EEE93968.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 71/182 (39%), Positives = 88/182 (48%), Gaps = 18/182 (9%)
 Frame = -2

Query: 494 PPPLS-------TTNRFLRHRNRYPPS---PQPLSSTAFYINHXXXXXXXXXXXXXXSED 345
           PPPL        TT+  + H + +        P S+T+   N               S++
Sbjct: 5   PPPLPNRFPSVYTTSPIVHHHHHHHHHLIFQPPFSATSTTTNFADSSLSYSKRLHYASQN 64

Query: 344 DT--ITQDDVVSLYPHRRYDFSPLLQFLXXXXXXXXXXXXXXXXS------LDQTELRLA 189
           D    + DDV+ L   RRYDF+PLL +L                +      LD TE +LA
Sbjct: 65  DIEGFSDDDVLPLQS-RRYDFTPLLDYLSKKITTSTDTDSDSDSASSSPTSLDPTEFQLA 123

Query: 188 ESYRVVPTPLWXXXXXXXXXXXXXXXXXSIAYALVTWLQKHNLCFSYELLYSILIHALGR 9
           ESYRVVP PLW                  +AYA+V WLQKHNLCFSYELLYSILIHALG+
Sbjct: 124 ESYRVVPGPLWHSLLKSLCTSSSSIG---LAYAVVLWLQKHNLCFSYELLYSILIHALGQ 180

Query: 8   SE 3
           SE
Sbjct: 181 SE 182