BLASTX nr result

ID: Atractylodes22_contig00022471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00022471
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   123   1e-26
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   121   5e-26
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   114   6e-24
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    96   4e-18
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 7/100 (7%)
 Frame = +2

Query: 2   IYFEVQNTPEKIKVKMAKLSMEGATIHWFNLLCAVEENISWENFKQALIERYGGRKNVNP 181
           IYF+VQNT +K++VK+A+LSMEG+TIHWFNLL   E+ +SWE  K+ALI RYGGR+  NP
Sbjct: 76  IYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENP 135

Query: 182 FEDLKDPTQTGAVEEYI-------TEVSRLPEAQYLGYFI 280
           FE+L    Q G+VEE++       ++V RLPE QYLGYF+
Sbjct: 136 FEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 175


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 7/100 (7%)
 Frame = +2

Query: 2   IYFEVQNTPEKIKVKMAKLSMEGATIHWFNLLCAVEENISWENFKQALIERYGGRKNVNP 181
           IYF+VQ+T + ++VK+A+LSMEG+TIHWFNLL   E+ +SWEN K+ALI RYGGR+  NP
Sbjct: 93  IYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENP 152

Query: 182 FEDLKDPTQTGAVEEYI-------TEVSRLPEAQYLGYFI 280
           FE+L    Q G+VEE++       ++V RLPE QYLGYF+
Sbjct: 153 FEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 192


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/100 (55%), Positives = 74/100 (74%), Gaps = 7/100 (7%)
 Frame = +2

Query: 2    IYFEVQNTPEKIKVKMAKLSMEGATIHWFNLLCAVEENISWENFKQALIERYGGRKNVNP 181
            IYF+VQNTP+ ++VK+++LSMEG TIHWFNLL   E+++S E  K+ALI RY GR+  NP
Sbjct: 766  IYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENP 825

Query: 182  FEDLKDPTQTGAVEEYI-------TEVSRLPEAQYLGYFI 280
            FE+L    Q G+VEE++       ++V RLPE QYLGYF+
Sbjct: 826  FEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFM 865


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
 Frame = +2

Query: 2   IYFEVQNTPEKIKVKMAKLSMEGATIHWFNLLCAVEENISWENFKQALIERYGGRKNVNP 181
           +YF VQNT  +IKV +A+L M+G TIH+F  L    E ++WE+ K AL+ERYGG  + N 
Sbjct: 103 VYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNV 162

Query: 182 FEDLKDPTQTGAVEEYITEVSR-------LPEAQYLGYFI 280
           FE L    Q G +EEYI +  R       LP  QYLGYF+
Sbjct: 163 FEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFV 202


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
 Frame = +2

Query: 5   YFEVQNTPEKIKVKMAKLSMEGATIHWFN-LLCAVEENISWENFKQALIERYGGRKNVNP 181
           +F++  TP +  V++A L +EG    WF   +C ++ ++ WE F +A+  R+G R ++  
Sbjct: 126 FFKLNATPWQQWVEIASLYLEGKAEIWFEGYMCGLDVSLEWEEFSKAICSRFGSRDDI-- 183

Query: 182 FEDLKDPTQTGAVEEYITEVSR-----------LPEAQYLGYFI 280
            E+    TQ G +EEY+                LPE+ Y+  FI
Sbjct: 184 VEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESYYISSFI 227


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