BLASTX nr result

ID: Atractylodes22_contig00021879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021879
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...   116   2e-24
emb|CBI26906.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis th...   114   6e-24
ref|XP_004168106.1| PREDICTED: ATP-dependent DNA helicase RecG-l...   110   9e-23

>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/62 (91%), Positives = 59/62 (95%)
 Frame = +3

Query: 3    LGRKQSGHLPEFPIARLEIDGNILQEAHLAALTILGKSHNLEQFPALKAELSMRQPLCLL 182
            LG+KQSGHLPEFPIARLEIDGNILQEAHLAAL ILG SH+LEQFP LKAELSMRQPLCLL
Sbjct: 975  LGKKQSGHLPEFPIARLEIDGNILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLL 1034

Query: 183  GD 188
            GD
Sbjct: 1035 GD 1036


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/62 (91%), Positives = 59/62 (95%)
 Frame = +3

Query: 3    LGRKQSGHLPEFPIARLEIDGNILQEAHLAALTILGKSHNLEQFPALKAELSMRQPLCLL 182
            LG+KQSGHLPEFPIARLEIDGNILQEAHLAAL ILG SH+LEQFP LKAELSMRQPLCLL
Sbjct: 927  LGKKQSGHLPEFPIARLEIDGNILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLL 986

Query: 183  GD 188
            GD
Sbjct: 987  GD 988


>ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|222863848|gb|EEF00979.1|
            predicted protein [Populus trichocarpa]
          Length = 888

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = +3

Query: 3    LGRKQSGHLPEFPIARLEIDGNILQEAHLAALTILGKSHNLEQFPALKAELSMRQPLCLL 182
            LG+KQSGHLPEFPIARLEIDGNILQEAH AAL +LG+SH+LE+FPALKAELSMRQPLCLL
Sbjct: 827  LGKKQSGHLPEFPIARLEIDGNILQEAHAAALKVLGESHDLERFPALKAELSMRQPLCLL 886

Query: 183  GD 188
            GD
Sbjct: 887  GD 888


>ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
            gi|330250357|gb|AEC05451.1| ATP-dependent DNA helicase
            RecG [Arabidopsis thaliana]
          Length = 973

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/62 (85%), Positives = 60/62 (96%)
 Frame = +3

Query: 3    LGRKQSGHLPEFPIARLEIDGNILQEAHLAALTILGKSHNLEQFPALKAELSMRQPLCLL 182
            LG+KQSGHLPEFP+ARLEIDGN+LQEAH+AAL +LG SH+LE+FPALKAELSMRQPLCLL
Sbjct: 912  LGKKQSGHLPEFPVARLEIDGNMLQEAHIAALNVLGDSHDLEKFPALKAELSMRQPLCLL 971

Query: 183  GD 188
            GD
Sbjct: 972  GD 973


>ref|XP_004168106.1| PREDICTED: ATP-dependent DNA helicase RecG-like [Cucumis sativus]
          Length = 513

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = +3

Query: 3   LGRKQSGHLPEFPIARLEIDGNILQEAHLAALTILGKSHNLEQFPALKAELSMRQPLCLL 182
           LG+KQSGHLPEFPIARLE+DGNIL++AHLAAL IL  SH+LEQFPALK ELSMRQPLCLL
Sbjct: 452 LGKKQSGHLPEFPIARLEVDGNILEDAHLAALKILSISHDLEQFPALKMELSMRQPLCLL 511

Query: 183 GD 188
           GD
Sbjct: 512 GD 513


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