BLASTX nr result

ID: Atractylodes22_contig00021804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021804
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509831.1| DNA binding protein, putative [Ricinus commu...   241   2e-61
ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-contai...   236   6e-60
ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...   230   5e-58
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              230   6e-58

>ref|XP_002509831.1| DNA binding protein, putative [Ricinus communis]
            gi|223549730|gb|EEF51218.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 656

 Score =  241 bits (616), Expect = 2e-61
 Identities = 139/350 (39%), Positives = 196/350 (56%), Gaps = 16/350 (4%)
 Frame = +3

Query: 45   MLDWVSNAARNPHDVAIGSLPNSSKWKKYKSNEIWKQVLVVKETLFAKRNLDSGNKAYGL 224
            ML+WV  AA++P   +IG++P  SK K  K NE+W Q +  ++ L  +R ++SG +   L
Sbjct: 299  MLNWVIQAAKSPDHPSIGNIPPLSKCKDNKGNELWAQAIRARDALVRRRQVNSGCERSLL 358

Query: 225  QKKRHTMHPSMYEDDKVPIHLSSKRIRCSQRVSS-VKXXXXXXXXXXXXXRTKRQKPDTK 401
            Q  +  +HPSMY+D   P   SS+R+RCS+R+ + VK             +++   P   
Sbjct: 359  QNHQK-IHPSMYKDAIPPSDPSSERVRCSERLPALVKPRSCSCCNSCSAPKSQLISPPKT 417

Query: 402  KIPQIPXXXXXXXXXXXXQETV-----------NITLG----AEVPEWTGVVSESDPKWL 536
            ++   P                           ++++G    AEVPEWTG+VSES+ KWL
Sbjct: 418  ELENAPKAKVLMAEDLSAATATLSSSGDIHIHRHVSVGRRFQAEVPEWTGLVSESESKWL 477

Query: 537  GTQMWPPPDGNYRKHEMNLGAIGKGRQSSCRCPSPGSADCVRFHIAKSRRRVKHTLGPLF 716
            GTQ WP   G +         IGKGR  SC C  PGS +CVRFHIA++R ++K  LG +F
Sbjct: 478  GTQAWPLEFGEHNAMVQE-DTIGKGRPESCGCELPGSVECVRFHIAENRIKLKIELGSVF 536

Query: 717  YKWKFNRMGEEASVSWSLEEETEFKSLVIKARQELTHRSKSRHEIMSNFWRRASESIPSK 896
            Y WKF+ MGEE ++ W+ EEE  FK +V   R  L    K        FW  + +    K
Sbjct: 537  YHWKFDCMGEEIALRWTAEEEKRFKDVV---RFNLPSLDKF-------FWDNSRKYFRRK 586

Query: 897  TKDVLVSYYFNVFVLRRRSYQNRIMPENIDSDDDEQEVGSVGDRSGYEKI 1046
            TK+ LVSYYFNVF+++RRSYQNR+ P++IDSDDDE E GS+ D  G + +
Sbjct: 587  TKEELVSYYFNVFLVQRRSYQNRVTPKHIDSDDDESEFGSLSDTYGQQAV 636


>ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-containing protein 1-like
            [Vitis vinifera]
          Length = 628

 Score =  236 bits (603), Expect = 6e-60
 Identities = 143/351 (40%), Positives = 192/351 (54%), Gaps = 16/351 (4%)
 Frame = +3

Query: 45   MLDWVSNAARNPHDVAIGSLPNSSKWKKYKSNEIWKQVLVVKETLFAKRNLDSGNKAYGL 224
            ML+WV+  A+NP D +IG LP  SKWK     E+WKQVL+V+E LF +R++D   +    
Sbjct: 276  MLNWVTTIAKNPCDPSIGKLPERSKWKLTGPGELWKQVLLVREALFLQRDVDLSAEQSIW 335

Query: 225  QKKRHTMHPSMYEDDKVPIHLSSKRIRCSQRVSSVKXXXXXXXXXXXXXRTKRQKPDT-- 398
            QKK+  MHPSMYED     H  S+R+R SQR+ S K              T+     +  
Sbjct: 336  QKKQK-MHPSMYED-----HAGSERLRYSQRLLSGKRSRSRACSESSSSATQSDLDKSPS 389

Query: 399  --------KKI-----PQIPXXXXXXXXXXXXQET-VNITLGAEVPEWTGVVSESDPKWL 536
                    K++     P I             ++  V     A +PEWTGVVSE D KWL
Sbjct: 390  PCMEDHHDKQLLGICDPSIGHSVAGLCGDSHVRKRPVGPAFQATIPEWTGVVSEIDSKWL 449

Query: 537  GTQMWPPPDGNYRKHEMNLGAIGKGRQSSCRCPSPGSADCVRFHIAKSRRRVKHTLGPLF 716
            GT++WP  D    K  +    IGKGRQ SC C  PGS  CV+FH+A+ R R+K  LG  F
Sbjct: 450  GTRVWPL-DKIEHKFLIERDPIGKGRQDSCGCQFPGSIACVQFHVAEKRIRIKLELGSAF 508

Query: 717  YKWKFNRMGEEASVSWSLEEETEFKSLVIKARQELTHRSKSRHEIMSNFWRRASESIPSK 896
              W+F++MGE   +SWS EE+  FK +V      +  R          FW    +S  +K
Sbjct: 509  QHWQFDKMGEVVGLSWSEEEKKRFKEIVRLNPPSMGVR----------FWDEIFKSFSTK 558

Query: 897  TKDVLVSYYFNVFVLRRRSYQNRIMPENIDSDDDEQEVGSVGDRSGYEKIH 1049
            +++ LVSYYFNVF+L+RR+ QNR+ P NIDSDDDE E G + +  G+E I+
Sbjct: 559  SREDLVSYYFNVFLLQRRADQNRLTPNNIDSDDDESEFGPLSNGFGHEAIN 609


>ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|222861580|gb|EEE99122.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  231 bits (588), Expect = 4e-58
 Identities = 137/358 (38%), Positives = 187/358 (52%), Gaps = 22/358 (6%)
 Frame = +3

Query: 45   MLDWVSNAARNPHDVAIGSLPNSSKWKKYKSNEIWKQVLVVKETLFAKRNLDSGNKAYGL 224
            ML+WV+  A++P D  +GSLP  SKWK Y + E WKQVLV +E+LF KRN DS + A G 
Sbjct: 82   MLNWVTEIAKDPCDPVVGSLPEWSKWKSYGNEECWKQVLVTRESLFLKRNADSTSSAEGF 141

Query: 225  QKKRHT-MHPSMYEDDK---------------VPIHLSSKRIRCSQRVSSVKXXXXXXXX 356
             K+++  MHP MY+D                  P   SS+ + CSQ  S+          
Sbjct: 142  VKQKYQKMHPCMYDDHAGSSYNLRERLKCRKLFPGETSSQALVCSQSSSAATQTDSDSCM 201

Query: 357  XXXXXRTKRQK------PDTKKIPQIPXXXXXXXXXXXXQETVNITLGAEVPEWTGVVSE 518
                      +      P TK+IP  P                     AEVPEWTG+ SE
Sbjct: 202  EGVYDGDSSTECSVLDLPITKRIPVGP------------------VFQAEVPEWTGMASE 243

Query: 519  SDPKWLGTQMWPPPDGNYRKHEMNLGAIGKGRQSSCRCPSPGSADCVRFHIAKSRRRVKH 698
            SD KWLGT++WP  + +  K  +    IGKGR  SC C  P S  CVRFHI + R RV  
Sbjct: 244  SDSKWLGTRVWPL-ETSINKFVIEREPIGKGRSDSCGCQVPKSIKCVRFHITERRSRVMR 302

Query: 699  TLGPLFYKWKFNRMGEEASVSWSLEEETEFKSLVIKARQELTHRSKSRHEIMSNFWRRAS 878
             LG  F +W+F++MGEE  +SWSLE++ +F ++V            +   +   FW    
Sbjct: 303  ELGKAFNQWRFDKMGEEVKLSWSLEDQKKFGAIV----------RSNPLSLDKCFWDEIF 352

Query: 879  ESIPSKTKDVLVSYYFNVFVLRRRSYQNRIMPENIDSDDDEQEVGSVGDRSGYEKIHA 1052
               PS+ ++ LVSYY+NVF+L+RR+ QNR  P++I+SDDDE E   V   S  E +++
Sbjct: 353  RCFPSRRREDLVSYYYNVFLLQRRANQNRSTPDSINSDDDESECELVNYGSRREAVNS 410


>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
            predicted protein [Populus trichocarpa]
          Length = 648

 Score =  230 bits (587), Expect = 5e-58
 Identities = 137/353 (38%), Positives = 185/353 (52%), Gaps = 21/353 (5%)
 Frame = +3

Query: 45   MLDWVSNAARNPHDVAIGSLPNSSKWKKYKSNEIWKQVLVVKETLFAKRNLDSGNKAYGL 224
            ML+WV   A+ P D +IG      KWK +K NE+W Q +  +E L  +R+ D   +   L
Sbjct: 285  MLNWVIQIAKCPDDPSIGVRSPQFKWKNHKGNELWLQAIRAREALLHRRHFDPNIEQSLL 344

Query: 225  Q------KKRHTMHPSMYEDDKVPIHLSSKRIRCSQRVSSV-KXXXXXXXXXXXXXRTKR 383
            Q      +    MHPSM+ED  V     ++R RCS+R+ ++ K             ++K 
Sbjct: 345  QVYNMNFQDNRKMHPSMFEDVSVLSEHFAERSRCSKRLPALAKPDVCSCCNSCSAPQSKS 404

Query: 384  QKP----------DTKKIPQIPXXXXXXXXXXXXQETVNITLG----AEVPEWTGVVSES 521
              P          + +    +                 ++ +G    AEVPEWT VVSES
Sbjct: 405  TSPLKTECENGLKEQELAVDLSSKNATFDGSGDGHVRRHVAVGPLFQAEVPEWTSVVSES 464

Query: 522  DPKWLGTQMWPPPDGNYRKHEMNLGAIGKGRQSSCRCPSPGSADCVRFHIAKSRRRVKHT 701
            D KWLGT++WP    N+      +  IG GR S C C  PGS  CVRFHIA+ R ++K  
Sbjct: 465  DSKWLGTRLWPLECENHNA-VFAMDPIGNGRPSVCGCQLPGSVGCVRFHIAEKRIKLKLE 523

Query: 702  LGPLFYKWKFNRMGEEASVSWSLEEETEFKSLVIKARQELTHRSKSRHEIMSNFWRRASE 881
            LG LFY W+F+RMGEE S+ W+ EEE  FK +V   +  L    K        FW    +
Sbjct: 524  LGYLFYHWQFDRMGEEVSLRWTTEEEKRFKDMV---KFNLLSAGKC-------FWDNKHK 573

Query: 882  SIPSKTKDVLVSYYFNVFVLRRRSYQNRIMPENIDSDDDEQEVGSVGDRSGYE 1040
              P KT++ LVSYYFN +++RRRSYQNR+ P+NIDSDDDE E GS  D  G+E
Sbjct: 574  YFPRKTREELVSYYFNAYLVRRRSYQNRVTPKNIDSDDDETEFGSFSDGYGHE 626


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  230 bits (586), Expect = 6e-58
 Identities = 138/352 (39%), Positives = 191/352 (54%), Gaps = 18/352 (5%)
 Frame = +3

Query: 45   MLDWVSNAARNPHDVAIGSLPNSSKWKKYKSNEIWK-QVLVVKETLFAKRNLDSGNKAYG 221
            ML+WV   A++P +   G+            NE++  Q+L V+E+L  +R + +  +   
Sbjct: 187  MLNWVREIAKHPEEPYKGNK---------NGNEVFSTQILRVRESLLIRRKVHTKEEQSL 237

Query: 222  LQKKRHTMHPSMYEDDKVPIHLSSKRIRCSQRVSSVKXXXXXXXXXXXXXRTKRQKPDTK 401
            LQK++  MHPSMYED+ V  H S+++ RCS+R+ SVK             ++K   P   
Sbjct: 238  LQKQK--MHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSCSAA----QSKLPGPHRT 291

Query: 402  KIPQIPXXXXXXXXXXXXQET-----------------VNITLGAEVPEWTGVVSESDPK 530
            K    P            + T                 V     AEVPEWTG V+ESD K
Sbjct: 292  KSESCPKEQALTPNEQEPENTNTLDDLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSK 351

Query: 531  WLGTQMWPPPDGNYRKHEMNLGAIGKGRQSSCRCPSPGSADCVRFHIAKSRRRVKHTLGP 710
            WLGTQ+WP  +G      +    +G+G+  SC C   GS +CVRFHIA+ R ++K  LG 
Sbjct: 352  WLGTQVWPLENGEC-SFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGS 410

Query: 711  LFYKWKFNRMGEEASVSWSLEEETEFKSLVIKARQELTHRSKSRHEIMSNFWRRASESIP 890
            LFY W+F+RMGEE S++W+ EEE  FK ++   R   + +S S       FW  A    P
Sbjct: 411  LFYHWRFDRMGEEISLAWTTEEEKRFKHMI---RLNSSLQSPS-------FWDNALRIFP 460

Query: 891  SKTKDVLVSYYFNVFVLRRRSYQNRIMPENIDSDDDEQEVGSVGDRSGYEKI 1046
            +KT++ LVSYYFNVF++RRR YQNR+ P  IDSDDDE E GS+G   G+E I
Sbjct: 461  TKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDELEFGSLGGSFGHEVI 512


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