BLASTX nr result

ID: Atractylodes22_contig00021614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021614
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300080.1| f-box family protein [Populus trichocarpa] g...    91   1e-16
ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatul...    81   8e-14
ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatul...    81   8e-14
ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|3554...    80   2e-13
ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    80   2e-13

>ref|XP_002300080.1| f-box family protein [Populus trichocarpa]
           gi|222847338|gb|EEE84885.1| f-box family protein
           [Populus trichocarpa]
          Length = 351

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/101 (42%), Positives = 63/101 (62%)
 Frame = -2

Query: 303 DRISNLPDEIIHHILSFLDMRYAVQTSTLSKNWKHIWTSMPHLNFNTETCRTLPQYAEFV 124
           DR+SNLP+ IIHHILSFLD +YAVQTS L+K W+++WTS+  L+ N+ + R L ++ +FV
Sbjct: 15  DRLSNLPNHIIHHILSFLDAKYAVQTSVLAKGWRNLWTSVHVLHLNSNSFRRLGRFKKFV 74

Query: 123 RHALSHRNHRAEVSAVELTCTGKWSQDFVKSILKYAYLHNV 1
              L+  NH +       T  G+      K ++ +A  H V
Sbjct: 75  VAVLNKLNHNSTAGTFLFTYRGRIDDYLKKRVIYFASFHGV 115


>ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509361|gb|AES90503.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 600

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/100 (40%), Positives = 59/100 (59%)
 Frame = -2

Query: 303 DRISNLPDEIIHHILSFLDMRYAVQTSTLSKNWKHIWTSMPHLNFNTETCRTLPQYAEFV 124
           D++S+LP+ +I HILSFLD ++AVQT  LS  WKH+W  +P L  ++    T+ ++A FV
Sbjct: 16  DKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIFV 75

Query: 123 RHALSHRNHRAEVSAVELTCTGKWSQDFVKSILKYAYLHN 4
            + L+ RN    + A+ L   G      +K IL Y   HN
Sbjct: 76  SNILTLRNSSTSLQALNLDRRGDIEPQLLKKILNYICSHN 115


>ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355507123|gb|AES88265.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 861

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/100 (40%), Positives = 59/100 (59%)
 Frame = -2

Query: 303 DRISNLPDEIIHHILSFLDMRYAVQTSTLSKNWKHIWTSMPHLNFNTETCRTLPQYAEFV 124
           D++S+LP+ +I HILSFLD ++AVQT  LS  WKH+W  +P L  ++    T+ ++A FV
Sbjct: 16  DKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIFV 75

Query: 123 RHALSHRNHRAEVSAVELTCTGKWSQDFVKSILKYAYLHN 4
            + L+ RN    + A+ L   G      +K IL Y   HN
Sbjct: 76  SNILTLRNSSTSLQALNLDRRGDIEPQLLKKILNYICSHN 115


>ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|355487963|gb|AES69166.1|
           F-box family-9 [Medicago truncatula]
          Length = 383

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303 DRISNLPDEIIHHILSFLDMRYAVQTSTLSKNWKHIWTSMPHLNFNTETCRTLPQ-YAEF 127
           DR+S LP+ I+ HILSFLD + AVQT  LSK+WK++W  +P L       +  P+ + +F
Sbjct: 15  DRLSVLPECILLHILSFLDPKEAVQTCILSKSWKNLWKYLPILKLTFRHFKKNPKGFTKF 74

Query: 126 VRHALSHRNHRAEVSAVELTCTGKWSQDFVKSILKYAYLHNV 1
           V   LS RN    +  ++  C G+     ++ ILKYA+ HNV
Sbjct: 75  VSQILSLRNDSTALHTLDFHCRGRLELHILERILKYAFSHNV 116


>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
           gi|222868939|gb|EEF06070.1| f-box family protein
           [Populus trichocarpa]
          Length = 360

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = -2

Query: 303 DRISNLPDEIIHHILSFLDMRYAVQTSTLSKNWKHIWTSMPHLNFNTETCRTLPQYAEFV 124
           DR+S+LPD IIH ILS +D+R AVQTS LSK W+ +WTS+  LNFN  TC     +  F 
Sbjct: 18  DRLSDLPDSIIHKILSLVDLRCAVQTSVLSKRWRFLWTSLTDLNFN-GTCMDFTNFVTFN 76

Query: 123 RHALSHRNHRAEVSAVELTCTGKWS--QDFVKSILKYAYLHNV 1
           R      + R + +  ++     WS     +  ++KYA  H++
Sbjct: 77  RFVSRVLSTREDSNVYKIQLYSTWSPHHSLLDMVIKYAVSHHI 119


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