BLASTX nr result

ID: Atractylodes22_contig00021579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00021579
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...   107   3e-21
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]   102   1e-19
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ...    63   1e-07
ref|XP_002328849.1| predicted protein [Populus trichocarpa] gi|2...    60   8e-07

>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
            product [Vitis vinifera]
          Length = 676

 Score =  107 bits (268), Expect = 3e-21
 Identities = 86/245 (35%), Positives = 108/245 (44%), Gaps = 23/245 (9%)
 Frame = -2

Query: 994  LRDAKPGTEPAPIGSVSGFGPRGNLPGEGPSPSGVIRGGRSGGYEPFKGGGWEYEPVSYP 815
            LRDA  G EPAP+G V GFG  G LPG  PS SG +  G SGG+E  KGGG EYEP S  
Sbjct: 473  LRDANGGVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQS-- 530

Query: 814  APQKDHDPRSFPAPPRDYEPRGYPAPPREYEPHGYAVPPRASGY---PGAVEVKMP---- 656
                                  YP            VPP A+GY     ++E K+P    
Sbjct: 531  ----------------------YP------------VPPAATGYHNVNSSMESKIPNNSV 556

Query: 655  ------GGGRVSGMRPNTIAVTGTRVKLQDPYAVG-----EMRGSSQQHLNAGHGVDVYQ 509
                  GGG V+ M      + G RVKLQDP + G     E+RGSS +HL A   +    
Sbjct: 557  SSVIGMGGGNVANMS----EMAGARVKLQDPQSGGSECVVEIRGSS-EHLTAAQSILQAF 611

Query: 508  GYNSGSGGQN-RPHHGNYGTQ----QGSFSDINSSAHTSYHSXXXXXXXXXXXTQGHYPE 344
              ++G+GGQN  P  G+Y       Q  + ++N+     Y S                 +
Sbjct: 612  MASAGAGGQNMNPQQGSYQNMSAHPQAPYQNMNAPPQVPYQSMNAPPQQAAAYPNMSAQQ 671

Query: 343  SSYQY 329
            SSYQY
Sbjct: 672  SSYQY 676


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score =  102 bits (254), Expect = 1e-19
 Identities = 82/212 (38%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
 Frame = -2

Query: 994 LRDAKPGTEPAPIGSVSGFGPRGNLPGEGPSPSGVIRGGRSGGYEPFKGGGWEYEPVSYP 815
           LRDA  G EPAP+G V GFG  G LPG  PS SG +  G SGG+E  KGGG EYEP S  
Sbjct: 501 LRDANGGVEPAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQS-- 558

Query: 814 APQKDHDPRSFPAPPRDYEPRGYPAPPREYEPHGYAVPPRASGY---PGAVEVKMP---- 656
                                 YP            VPP A+GY     ++E K+P    
Sbjct: 559 ----------------------YP------------VPPAATGYHNVNSSMESKIPNNSV 584

Query: 655 ------GGGRVSGMRPNTIAVTGTRVKLQDPYAVG-----EMRGSSQQHLNAGHGVDVYQ 509
                 GGG V+ M      + G RVKLQDP + G     E+RGSS +HL A   +    
Sbjct: 585 SSVIGMGGGNVANMS----EMAGARVKLQDPQSGGSECVVEIRGSS-EHLTAAQSILQAF 639

Query: 508 GYNSGSGGQNRPHHGNYGTQQGSFSDINSSAH 413
             ++G+GGQ      N   QQGS+   N SAH
Sbjct: 640 MASAGAGGQ------NMNPQQGSYQ--NMSAH 663


>ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|222870785|gb|EEF07916.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -2

Query: 994 LRDAKPGTEPAPIGSVSGFGPRGNLPGEGPSPSGVIRGGRSGGYEPFK 851
           LRDA  GTEP P G V GFGP  NLPG GP PSG++    SGGYEP +
Sbjct: 470 LRDANAGTEPGPAGPVPGFGPARNLPGRGPQPSGMMAASSSGGYEPLR 517


>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 537

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = -2

Query: 994 LRDAKPGTEPAPIGSVSGFGPRGNLPGEGPSPSGVIRGGRSGGYEPFKGGGWEYEPVSYP 815
           LRD   G EP P+G + GFG   +LPG G   SG++    SGGYEP +    EYE  SYP
Sbjct: 472 LRDVNAGAEPGPVGPIQGFGAARSLPGRG--SSGMMGASSSGGYEPLRDTEHEYESHSYP 529

Query: 814 AP 809
            P
Sbjct: 530 VP 531


>ref|XP_002328849.1| predicted protein [Populus trichocarpa] gi|222839147|gb|EEE77498.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 42/144 (29%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
 Frame = -2

Query: 850 GGGWEYEPVSYPAPQKDHDPRSFPA---PPRDYEPRGYPA---PPREYEPHGYAVPPRAS 689
           G G+ +    YP     + P+ +P    PP+ Y P+GYP    PP  Y P GY   P A 
Sbjct: 20  GHGFGHGAPGYPPQPGAYPPQGYPPQGYPPQGYPPQGYPPAGYPPGAYPPSGYPPGPSAP 79

Query: 688 GYPGAVEVKMPGGGRVSGMRPNTIAVTGTRVKLQDPYAVGEMRGSSQQHLNAGHGVDVYQ 509
             PG        GG + G+      + G        Y    ++G  +     GHG     
Sbjct: 80  HQPGH------SGGGLGGL------LAGGAAAAAAAYGAHALQGVGRGGYGGGHG----- 122

Query: 508 GYNSGSGGQNRPHHGNYGTQQGSF 437
           GY  G GG    + G YG   G F
Sbjct: 123 GYGGGHGGYGGGYGGGYGGGHGKF 146


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