BLASTX nr result

ID: Atractylodes22_contig00020746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020746
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...   115   3e-24
ref|XP_003615322.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   105   5e-21
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...   105   5e-21
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...   103   1e-20
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   103   1e-20

>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/137 (40%), Positives = 84/137 (61%)
 Frame = +2

Query: 17  VNKDRLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSQHFDSLPKFA 196
           V +DRLS LPD ++  ILS  + K A QTC+LS RWK +W  +  L  S++HF+++  F 
Sbjct: 9   VKQDRLSDLPDSVVLHILSFFNTKEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPFT 68

Query: 197 EFMTHVLSHRNHQTEVSSVKLHFYGAASQDFVRKIANYALSHNVQELILSLPKNHNEFPP 376
           +F++HVLSHR+  T + ++  H         ++KI  YA+SH+VQ+L +S+  +   FPP
Sbjct: 69  KFVSHVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQISVDADFQCFPP 128

Query: 377 CLFSSQSLKHFTLSSNF 427
           C FS  +L    LS  F
Sbjct: 129 CFFSCNTLTSLKLSLGF 145


>ref|XP_003615322.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355516657|gb|AES98280.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 359

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/134 (38%), Positives = 81/134 (60%)
 Frame = +2

Query: 17  VNKDRLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSQHFDSLPKFA 196
           + KDRLS LPD LI +ILS +  K A+QTC+LS R+  +W  +P L  +S  F  L  F 
Sbjct: 6   MEKDRLSELPDHLILQILSFLFAKQAVQTCILSKRFDNLWKRLPTLRLTSSSFKHLKDFT 65

Query: 197 EFMTHVLSHRNHQTEVSSVKLHFYGAASQDFVRKIANYALSHNVQELILSLPKNHNEFPP 376
           +F++ +LS R+H T + S+  H +       ++++  YA+SHNV+++ + +  +   FPP
Sbjct: 66  KFVSKILSLRDHSTSLHSLTFHRHSLVEPHLLKRVLKYAVSHNVEQIYVRVKCDIQHFPP 125

Query: 377 CLFSSQSLKHFTLS 418
            LFSS +L    L+
Sbjct: 126 TLFSSHTLTSLKLA 139


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/138 (39%), Positives = 82/138 (59%)
 Frame = +2

Query: 2   NVRSVVNKDRLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSQHFDS 181
           N  +  N+DRLS L D ++  ILS ++ K A+QTC+LS RWK +W  +P L   S  F +
Sbjct: 9   NSNNSENQDRLSDLSDCVLLHILSSLNTKHAVQTCILSTRWKNLWKRLPSLALRSSDFRN 68

Query: 182 LPKFAEFMTHVLSHRNHQTEVSSVKLHFYGAASQDFVRKIANYALSHNVQELILSLPKNH 361
           + +FA+F++ VLS RN  T + +V            ++KI  YA+SHNVQ+L +S+  N 
Sbjct: 69  VKRFAKFVSRVLSLRNDSTSLHTVDFCRTAIVEPYLLKKIVKYAVSHNVQQLDVSVAGNM 128

Query: 362 NEFPPCLFSSQSLKHFTL 415
             FPP  FS ++L   +L
Sbjct: 129 EYFPPSFFSCRTLTSLSL 146


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
           F-box family-1 [Medicago truncatula]
          Length = 384

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/133 (40%), Positives = 76/133 (57%)
 Frame = +2

Query: 2   NVRSVVNKDRLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSQHFDS 181
           N  +   +DR+S LPD LI  ILS + +K  +QT +LS RWK +W  +P L  +S HF +
Sbjct: 7   NYNNDKKEDRISDLPDGLILHILSSLKVKQTVQTSILSKRWKNLWKHLPTLTLTSSHFKT 66

Query: 182 LPKFAEFMTHVLSHRNHQTEVSSVKLHFYGAASQDFVRKIANYALSHNVQELILSLPKNH 361
           L  F +F+T +LS RN  T + ++K  + G        KI NYA+SHNV EL L    + 
Sbjct: 67  LKAFTKFVTPLLSLRNVPTSLHTLKFIYNGTIDPRLFEKILNYAVSHNVNELQLKGTCDI 126

Query: 362 NEFPPCLFSSQSL 400
            + P C FS  +L
Sbjct: 127 QQLPSCFFSCNTL 139


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/147 (42%), Positives = 85/147 (57%), Gaps = 15/147 (10%)
 Frame = +2

Query: 20  NKDRLSSLPDELIHRILSCIDIKFAIQTCLLSPRWKFVWTSMPCLNFSSQHFDSLPKFAE 199
           ++DRLS +PD +IH ILS ++ K AIQTC+LS RW+++W S+PCLNFSS+ F  L  F +
Sbjct: 54  SEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKK 113

Query: 200 FMTHVLSHRNHQTEVSSVKLHFY------GAASQDFVRKIANYALSHNVQELILSLPKNH 361
           F+  VL+HR    + S VKL  Y       A  Q  + K+  YA SH V+E+ ++L    
Sbjct: 114 FVLWVLNHR----DSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKINLRAKT 169

Query: 362 N---------EFPPCLFSSQSLKHFTL 415
                     E P  LF+ QSLK   L
Sbjct: 170 AGRTSGSPPVEIPFSLFTCQSLKKLEL 196


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