BLASTX nr result

ID: Atractylodes22_contig00020413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020413
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein ...    62   7e-08
ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein ...    61   1e-07
ref|XP_002454772.1| hypothetical protein SORBIDRAFT_04g037060 [S...    56   4e-06

>ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 459

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 30/53 (56%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 576 NSDCNVGADCCGKSKTCCGNNNGIGLKGVGEDVV-DYPMDYYAQDGGEWNSCY 421
           N  C  G  CC KS +CC +  G      GED   DYPMDYYAQDGGEWNS Y
Sbjct: 391 NEVCEEGEGCCNKSGSCCEDAKG------GEDFGGDYPMDYYAQDGGEWNSSY 437


>ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 467

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -2

Query: 549 CCGKSKTCCGNNNGIGLKGVGEDVV-DYPMDYYAQDGGEWNSCY 421
           CC KS +CCG+      KG GED   DYPMDYYAQDGGEWNS Y
Sbjct: 401 CCNKSGSCCGD-----AKGGGEDFGGDYPMDYYAQDGGEWNSSY 439


>ref|XP_002454772.1| hypothetical protein SORBIDRAFT_04g037060 [Sorghum bicolor]
           gi|241934603|gb|EES07748.1| hypothetical protein
           SORBIDRAFT_04g037060 [Sorghum bicolor]
          Length = 487

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = -2

Query: 558 GADCCGKSKTCCGNNNGIGLKGVGEDVVDYPMDYYAQDGGEWNSCY 421
           G+ CC  S TC GN N  G    G+   DYPMDYY+QDGG+WNSCY
Sbjct: 406 GSGCCSGSGTC-GNCNCSG----GDFGGDYPMDYYSQDGGDWNSCY 446


Top