BLASTX nr result

ID: Atractylodes22_contig00020345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020345
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera] gi...   164   7e-39
ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]       153   1e-35
ref|XP_002524914.1| rer1 protein, putative [Ricinus communis] gi...   153   2e-35
ref|XP_001779237.1| predicted protein [Physcomitrella patens sub...   152   2e-35
gb|AFK42932.1| unknown [Medicago truncatula]                          150   8e-35

>ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera]
           gi|296082366|emb|CBI21371.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/118 (66%), Positives = 92/118 (77%), Gaps = 4/118 (3%)
 Frame = +3

Query: 180 GDNDFKSSG----IPEWTNALSRRYQYLLDKSTPHVFLRWIGVTLAFFIYSLRVYFVQGF 347
           G  D  SS     +  WT+ +SR+YQ+LLDKSTPH+  RWIG     FIY +RVYFVQGF
Sbjct: 10  GVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYIVRVYFVQGF 69

Query: 348 YIITYALGIYVLQLFLAFLSPQVDPELQELTDDGPSLPTRGSEEFRPFVRRLPEFKFW 521
           YI++Y LGIY+L L + FLSPQVDPE+QEL  DGP+LPTRGS+EFRPFVRRLPEFKFW
Sbjct: 70  YIVSYGLGIYILNLLIGFLSPQVDPEIQELV-DGPTLPTRGSDEFRPFVRRLPEFKFW 126


>ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]
          Length = 191

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/114 (62%), Positives = 88/114 (77%)
 Frame = +3

Query: 180 GDNDFKSSGIPEWTNALSRRYQYLLDKSTPHVFLRWIGVTLAFFIYSLRVYFVQGFYIIT 359
           GD+    + I  W  A+S++YQ++LDK+TPHV  RWIG  +   +Y LRVY VQGFYI++
Sbjct: 6   GDDHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVS 65

Query: 360 YALGIYVLQLFLAFLSPQVDPELQELTDDGPSLPTRGSEEFRPFVRRLPEFKFW 521
           YALGIY+L L + FLSPQVDPE+     DGP+LPTRGS+EFRPFVRRLPEFKFW
Sbjct: 66  YALGIYILNLLIGFLSPQVDPEI----SDGPTLPTRGSDEFRPFVRRLPEFKFW 115


>ref|XP_002524914.1| rer1 protein, putative [Ricinus communis]
           gi|223535749|gb|EEF37411.1| rer1 protein, putative
           [Ricinus communis]
          Length = 206

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/121 (61%), Positives = 87/121 (71%), Gaps = 6/121 (4%)
 Frame = +3

Query: 177 GGDNDFKSSG------IPEWTNALSRRYQYLLDKSTPHVFLRWIGVTLAFFIYSLRVYFV 338
           GG  D  S        I  WT  +S+RYQ+LLDK+ PHV  RWI   +   IY+LRVYFV
Sbjct: 13  GGGEDLSSLSSTPATVISRWTFTVSQRYQHLLDKTVPHVLRRWIACLVVALIYALRVYFV 72

Query: 339 QGFYIITYALGIYVLQLFLAFLSPQVDPELQELTDDGPSLPTRGSEEFRPFVRRLPEFKF 518
           QGFYIITY LGIY+L L + FLSPQ+DPE+     DGP+LPTRGS+EFRPFVRRLPEFKF
Sbjct: 73  QGFYIITYGLGIYMLNLLIGFLSPQIDPEVL----DGPTLPTRGSDEFRPFVRRLPEFKF 128

Query: 519 W 521
           W
Sbjct: 129 W 129


>ref|XP_001779237.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669336|gb|EDQ55925.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 193

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/120 (59%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = +3

Query: 168 DPIGGDNDFKSSGIP--EWTNALSRRYQYLLDKSTPHVFLRWIGVTLAFFIYSLRVYFVQ 341
           D + GD+ F +S  P  +W + ++RR+QY LDKSTPH  LRW+G  +   IY LR YFVQ
Sbjct: 2   DGLHGDDAFGASSNPAMKWRDQMARRFQYYLDKSTPHAGLRWVGTLVMAAIYCLRAYFVQ 61

Query: 342 GFYIITYALGIYVLQLFLAFLSPQVDPELQELTDDGPSLPTRGSEEFRPFVRRLPEFKFW 521
           GFYI+TY LGIY+L L + FLSPQVDPE      +GP+LPT+GS+EF+PF+RRLPEFKFW
Sbjct: 62  GFYIVTYGLGIYLLNLLIGFLSPQVDPE-----SEGPALPTKGSDEFKPFIRRLPEFKFW 116


>gb|AFK42932.1| unknown [Medicago truncatula]
          Length = 192

 Score =  150 bits (380), Expect = 8e-35
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = +3

Query: 198 SSGIPEWTNALSRRYQYLLDKSTPHVFLRWIGVTLAFFIYSLRVYFVQGFYIITYALGIY 377
           ++ I  W    SRRYQ++LDKSTPHV  RW+G  +   +Y LRVY VQGFY+++Y LGIY
Sbjct: 9   AAAITRWKFEASRRYQHILDKSTPHVSQRWLGCLVVALVYVLRVYIVQGFYVVSYGLGIY 68

Query: 378 VLQLFLAFLSPQVDPELQELTDDGPSLPTRGSEEFRPFVRRLPEFKFW 521
           +L L + FLSPQVDPE+ +  D+GPSLPT GS+EFRPFVRRLPEFKFW
Sbjct: 69  ILNLLIGFLSPQVDPEILD-ADNGPSLPTSGSDEFRPFVRRLPEFKFW 115


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