BLASTX nr result

ID: Atractylodes22_contig00020339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020339
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...   179   9e-43
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]   175   1e-41
ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|2...   172   8e-41
ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38
ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycin...   162   1e-37

>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score =  179 bits (453), Expect = 9e-43
 Identities = 100/198 (50%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
 Frame = +2

Query: 248 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXXVRIRI-------SHDTPTSFLQRS 406
           MAGMLPGVE ARRRR  +                      +        H T +S +QRS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60

Query: 407 MGYQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMEN 586
           +  Q+  D+KLGG AREAKERLD RLR   KSE  R+++ +      GR     +M +  
Sbjct: 61  VLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVDGR-----AMVVGE 115

Query: 587 LQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCL 766
           LQ EVFGSK+SGSKR  WG+  LSWK+S+Q ECAICL+ FKA E   HLPCAHRFHS CL
Sbjct: 116 LQTEVFGSKRSGSKRFSWGK--LSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCL 173

Query: 767 LPWLECNAHCPYCRTTVF 820
           +PWLE NAHCP CR  +F
Sbjct: 174 MPWLETNAHCPCCRMGIF 191


>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
          Length = 193

 Score =  175 bits (443), Expect = 1e-41
 Identities = 99/198 (50%), Positives = 119/198 (60%), Gaps = 7/198 (3%)
 Frame = +2

Query: 248 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXXVRIRI-------SHDTPTSFLQRS 406
           MAGMLPGVE ARRRR  +                      +        H T +S +QRS
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQRS 60

Query: 407 MGYQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMEN 586
           +  Q+  D+KLGG AREAKERLD RLR   KSE  R+++ +      GR     +M +  
Sbjct: 61  VLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVDGR-----AMVVGE 115

Query: 587 LQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCL 766
           LQ EVFGSK+SGSKR  WG+  LSWK+S+Q ECAICL+ FKA E   HLPCAHRFHS CL
Sbjct: 116 LQTEVFGSKRSGSKRFSWGK--LSWKASDQVECAICLEGFKAGESLVHLPCAHRFHSRCL 173

Query: 767 LPWLECNAHCPYCRTTVF 820
           +PWLE NAHCP  R  +F
Sbjct: 174 MPWLETNAHCPCXRMGIF 191


>ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|222866006|gb|EEF03137.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  172 bits (436), Expect = 8e-41
 Identities = 92/193 (47%), Positives = 117/193 (60%), Gaps = 3/193 (1%)
 Frame = +2

Query: 248 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXXVRIRISHDT---PTSFLQRSMGYQ 418
           MAGMLPGVE ARRRR  +                       SH++     S LQRS+  Q
Sbjct: 1   MAGMLPGVECARRRRFHQSGDSLGAPAHGWSRKPSFCLYTSSHESYHGSVSSLQRSVSSQ 60

Query: 419 SDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMENLQME 598
           + ED+KLGG AREAKERLD RLR      +++ + ++   T   R     SM +  LQME
Sbjct: 61  AYEDEKLGGVAREAKERLDERLR------LQKKKTAETTSTGNLRDVDGRSMVLGELQME 114

Query: 599 VFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCLLPWL 778
           V+G+K+SGSKR  W +  LSWK+++QDEC ICLD+FK+ E   HLPCAHR+H  CL+PWL
Sbjct: 115 VYGTKRSGSKRFNWAK--LSWKAADQDECTICLDRFKSGETLVHLPCAHRYHPRCLVPWL 172

Query: 779 ECNAHCPYCRTTV 817
           E N HCP CR  +
Sbjct: 173 ENNGHCPCCRMEI 185


>ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|222855290|gb|EEE92837.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  162 bits (410), Expect = 8e-38
 Identities = 94/199 (47%), Positives = 114/199 (57%), Gaps = 9/199 (4%)
 Frame = +2

Query: 248 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXXVRIRISHDT---PTSFLQRSMGYQ 418
           MAG+LPGVE ARRRR  R                       SH+      S LQRS+  Q
Sbjct: 1   MAGVLPGVECARRRRFHRSGDSLGAPAHGWTRRPSFCLYTSSHENHHGSISSLQRSILNQ 60

Query: 419 SDEDDKLGGAAREAKERLDGRLRGHLKS-EIRRHQNSQ-----ERPTSVGRRSSTTSMAM 580
           + ED+KLGG A+EAKERLD RLR   K  EI R   +       + T   R     SM  
Sbjct: 61  AYEDEKLGGVAKEAKERLDERLRMQKKKPEITRKTMASAQFIWHKSTGNLRGVDGRSMVP 120

Query: 581 ENLQMEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSD 760
             LQMEV+G K+SGSKR +W +  LSWK+++QDEC ICLD+FK+ E   HLPCAHR+H  
Sbjct: 121 GELQMEVYGPKRSGSKRYKWAK--LSWKAADQDECTICLDRFKSGETLVHLPCAHRYHPK 178

Query: 761 CLLPWLECNAHCPYCRTTV 817
           CL+PWLE N  CP CR  +
Sbjct: 179 CLVPWLENNGQCPCCRMEI 197


>ref|NP_001238250.1| uncharacterized protein LOC100527583 [Glycine max]
           gi|255632685|gb|ACU16694.1| unknown [Glycine max]
          Length = 202

 Score =  162 bits (409), Expect = 1e-37
 Identities = 92/196 (46%), Positives = 115/196 (58%), Gaps = 5/196 (2%)
 Frame = +2

Query: 248 MAGMLPGVESARRRRLPRXXXXXXXXXXXXXXXXXX--VRIRISHD---TPTSFLQRSMG 412
           MAGMLPGVE ARRRRL R                         +H+   + +S LQRSM 
Sbjct: 15  MAGMLPGVECARRRRLHRCLDSNSTSLTSHASTRRSSFCLYTSNHECRLSLSSSLQRSML 74

Query: 413 YQSDEDDKLGGAAREAKERLDGRLRGHLKSEIRRHQNSQERPTSVGRRSSTTSMAMENLQ 592
           YQ   D+ +GG  REAK+RLD + R H  SE +R QNS +     GRR+      +    
Sbjct: 75  YQPHPDENMGGVVREAKQRLDDKFRAHRNSENKR-QNSTK--CVEGRRTR-----IAEFH 126

Query: 593 MEVFGSKKSGSKRLRWGRMGLSWKSSNQDECAICLDQFKASEKATHLPCAHRFHSDCLLP 772
            EV+GSKKSGS+R  W +   SWK+S Q++CA+CL+ F+  E   HLPCAHRFH  CL P
Sbjct: 127 TEVYGSKKSGSRRFSWTKW--SWKASEQEDCAVCLESFRVGETLIHLPCAHRFHDRCLKP 184

Query: 773 WLECNAHCPYCRTTVF 820
           WLE N+HCP CRTT+F
Sbjct: 185 WLENNSHCPCCRTTIF 200


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