BLASTX nr result

ID: Atractylodes22_contig00020241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020241
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   335   9e-90
ref|XP_002328177.1| predicted protein [Populus trichocarpa] gi|2...   331   1e-88
ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   328   1e-87
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   324   2e-86
emb|CBI30239.3| unnamed protein product [Vitis vinifera]              324   2e-86

>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
           sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
           splicing factor U2af small subunit A-like [Cucumis
           sativus]
          Length = 326

 Score =  335 bits (858), Expect = 9e-90
 Identities = 159/177 (89%), Positives = 161/177 (90%)
 Frame = +3

Query: 96  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 275
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 276 GVDAQGNPIDPRKIQDHXXXXXXXXXXXXNKYGEIESLNVCDNLADHMVGNVYVQFREEE 455
           GVDAQGNPIDPR IQDH            NKYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 456 YAAKALKNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIG 626
            AA AL+NLSGR+YAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKRIG
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIG 177


>ref|XP_002328177.1| predicted protein [Populus trichocarpa] gi|222837692|gb|EEE76057.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  331 bits (848), Expect = 1e-88
 Identities = 155/177 (87%), Positives = 161/177 (90%)
 Frame = +3

Query: 96  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 275
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS+SPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP 60

Query: 276 GVDAQGNPIDPRKIQDHXXXXXXXXXXXXNKYGEIESLNVCDNLADHMVGNVYVQFREEE 455
           GVDAQGNPIDPR+IQ H             KYGEIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 456 YAAKALKNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRIG 626
           +A+ ALKNL+GR+YAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKRIG
Sbjct: 121 HASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIG 177


>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  328 bits (840), Expect = 1e-87
 Identities = 153/176 (86%), Positives = 162/176 (92%)
 Frame = +3

Query: 96  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 275
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 276 GVDAQGNPIDPRKIQDHXXXXXXXXXXXXNKYGEIESLNVCDNLADHMVGNVYVQFREEE 455
           GVDA G+PIDPRKIQDH            +KYG+IESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 456 YAAKALKNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 623
           +AA A++NL+GR+YAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 176


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
           vinifera]
          Length = 343

 Score =  324 bits (830), Expect = 2e-86
 Identities = 150/176 (85%), Positives = 160/176 (90%)
 Frame = +3

Query: 96  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 275
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 276 GVDAQGNPIDPRKIQDHXXXXXXXXXXXXNKYGEIESLNVCDNLADHMVGNVYVQFREEE 455
           GVD QG P+DPRKIQ+H            +KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 456 YAAKALKNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 623
           +AA AL+NL+GR+YAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKI 176


>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  324 bits (830), Expect = 2e-86
 Identities = 150/176 (85%), Positives = 160/176 (90%)
 Frame = +3

Query: 96  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 275
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 276 GVDAQGNPIDPRKIQDHXXXXXXXXXXXXNKYGEIESLNVCDNLADHMVGNVYVQFREEE 455
           GVD QG P+DPRKIQ+H            +KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 456 YAAKALKNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 623
           +AA AL+NL+GR+YAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKI 176


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