BLASTX nr result

ID: Atractylodes22_contig00020200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020200
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...   207   3e-51
ref|XP_003532718.1| PREDICTED: ATP-dependent DNA helicase Q-like...   191   2e-46
ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like...   183   8e-44
emb|CBI27562.3| unnamed protein product [Vitis vinifera]              165   2e-38
gb|AAG50580.1|AC079280_11 ATP-dependent DNA helicase RecQ, putat...   153   7e-35

>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis vinifera]
          Length = 941

 Score =  207 bits (528), Expect = 3e-51
 Identities = 136/326 (41%), Positives = 174/326 (53%)
 Frame = +1

Query: 196  ETLPVGSSCLSKFSHFSKIRKPCLNFESTEKVIDPGLEAAKVGVSESEGGDFNVNDSERV 375
            ETLP G    SK + FSK++KPC   +  E   +P L +                    +
Sbjct: 121  ETLPAGY--FSKVASFSKLQKPCPKPDPVEN--EPSLASG-------------------L 157

Query: 376  VKKHPNLIGSFGSGLEQGNTPDPKCVYETLGGDVNVRDLGKVVKKHPNLIGSCVFPTAQV 555
              K P+   +  +G                          K VKKH NLIGS V P   V
Sbjct: 158  TPKQPHACEAVSTG-----------------------SAVKFVKKHCNLIGSDVNPKP-V 193

Query: 556  SKPKFANEGNFVRLNINGHGGRKKFANKVRKRNPNAYNAXXXXXXXXXXXXXXXXXXXXX 735
             +PK  +EGNFVRLNING+G  +KF NK ++++ NA +                      
Sbjct: 194  KRPKCGSEGNFVRLNINGYG--RKFTNKGKRKSYNASSGARRTFRRTKRKSKAEGGAEED 251

Query: 736  XXXXXXXXLRLEKNEGTEIRLDLEVIEQAVLDVRHAPSDENLVKLLKLTHGYDSFRDGQL 915
                      +EK     ++ D E+IE A L+V++  SDE LVKLL LTHGYDSFRDGQL
Sbjct: 252  EDGLVLETPTMEKQG--RVKFDGELIEAAALEVQNEASDEKLVKLLGLTHGYDSFRDGQL 309

Query: 916  ETIKLLLAGKSSMVILPTGAGKSLCYQLPALVLQGMTLVISPLVALMFDQLKQLPPVIPG 1095
            E I+++L GKS+M++LPTGAGKSLCYQLPALVL G+TLV+SPLVALM DQLKQLPP+IPG
Sbjct: 310  EAIRMVLEGKSTMLVLPTGAGKSLCYQLPALVLPGITLVVSPLVALMIDQLKQLPPMIPG 369

Query: 1096 GXXXXXXXXXXXXXXXRQVQEGALKV 1173
            G               RQ++EG +KV
Sbjct: 370  GLLSSSQSAEETSETLRQLREGTIKV 395


>ref|XP_003532718.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Glycine max]
          Length = 861

 Score =  191 bits (486), Expect = 2e-46
 Identities = 137/360 (38%), Positives = 177/360 (49%), Gaps = 2/360 (0%)
 Frame = +1

Query: 100  PIPSTTRTS-DINLPFQIRRPPGCDSFDTVCPTETLPVGSSCLSKFSHFSKIRKPCLNFE 276
            PI   T  S   +LPFQIRRP    S       ETLP G    S  + FSKIR+P LN E
Sbjct: 63   PIQQATLLSLPTDLPFQIRRPSDAPSISY--SIETLPAGYFSSSHSASFSKIRRPLLNLE 120

Query: 277  STEKVIDPGLEAAKVGVSESEGGDFNVNDSERVVKKHPNLIGSFGSGLEQGNTPDPKCVY 456
             +E  ++  +  +    S +EG D                                    
Sbjct: 121  PSE--VEQPVFTSGASDSRAEGAD------------------------------------ 142

Query: 457  ETLGGDVNVRDLGKVVKKHPNLIGSCVFPTAQVSKPKFANEGNFVRLNINGHGGRKKFAN 636
                    +R  GK   + PNLIGS     +   +   A EGNFV+LN+NG   RKKF N
Sbjct: 143  --------LRKRGK--SQLPNLIGSSAPMPSVKPRTSGAGEGNFVKLNMNGK--RKKFLN 190

Query: 637  KVRKRNPNAYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLEKNEGTEIR-LDLEVI 813
            K  K     Y +                               L++  G + R +D + +
Sbjct: 191  KRGKFGGKRYKSWRFKSQREKEEEQEEAVG------------ELKQRGGCKRREIDGDAV 238

Query: 814  EQAVLDVRHAPSDENLVKLLKLTHGYDSFRDGQLETIKLLLAGKSSMVILPTGAGKSLCY 993
            E+A    R  PS+ENLVKLL+L HGYD FRDGQ+E IK++LAGKSS+V+LPTGAGKSLCY
Sbjct: 239  EEAATAARKEPSEENLVKLLRLVHGYDCFRDGQVEAIKMVLAGKSSVVVLPTGAGKSLCY 298

Query: 994  QLPALVLQGMTLVISPLVALMFDQLKQLPPVIPGGXXXXXXXXXXXXXXXRQVQEGALKV 1173
            QLPA++L G+TLV+SPLVALM DQL+QLP VI GG               +Q+++G +KV
Sbjct: 299  QLPAVILPGVTLVVSPLVALMIDQLRQLPHVIMGGLLSSTQTPEEASESLKQLRQGGIKV 358


>ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Cucumis sativus]
            gi|449495007|ref|XP_004159708.1| PREDICTED: ATP-dependent
            DNA helicase Q-like 5-like [Cucumis sativus]
          Length = 952

 Score =  183 bits (464), Expect = 8e-44
 Identities = 136/379 (35%), Positives = 187/379 (49%), Gaps = 10/379 (2%)
 Frame = +1

Query: 67   PNIDASDLFQTPIPSTTRTSDINLPFQIRRPPGCDSFDTVCPTET---LPVGSSCLSKFS 237
            P+ D     + P P  T      LP+QIRR    D    +  +E+   LP G    SK  
Sbjct: 69   PSSDVKHSEKEPSPDWTPLP--TLPYQIRR--ASDQSRAISSSESMEMLPAGF--FSKSP 122

Query: 238  HFSKIRKPCLNFESTEK---VIDPGLEAAKVGVSESEGGDFNVNDSERVVKKHPNLIGSF 408
             F K R+  LNFE++E    +++P                  +N++E  +          
Sbjct: 123  SFMKFRRSSLNFETSEDNRTLLEP----------------IQLNNAETEIA--------- 157

Query: 409  GSGLEQGNTPDPKCVYETLGGDVNVRDLGKVVKKHPNLIGSCVFPTAQVSKPKFANEGNF 588
            G         D  C   +LG  V      K V+ HPNLIG+ V     +   K   EGNF
Sbjct: 158  GCSTADWGMKDDVC---SLGNRV------KSVRTHPNLIGTHV-SVPPIKVRKCGGEGNF 207

Query: 589  VRLNINGHGGRKKFANKVRKRN---PNAYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 759
            V+LN+NG  G++KF  K  KR     ++Y                               
Sbjct: 208  VKLNMNG--GKRKFIKKFSKRKYGERSSYRPRRKTKTNLKTEDSEEAGSFCDEDGLVTET 265

Query: 760  LRLEKNEGTE-IRLDLEVIEQAVLDVRHAPSDENLVKLLKLTHGYDSFRDGQLETIKLLL 936
             +  + +G    + D   IE+ + +VR+ PSD+NLVKLL L +GYDSF+DGQLE IK++L
Sbjct: 266  TQHPQKQGNGGAKFDPITIEETISNVRNDPSDDNLVKLLTLAYGYDSFQDGQLEAIKMVL 325

Query: 937  AGKSSMVILPTGAGKSLCYQLPALVLQGMTLVISPLVALMFDQLKQLPPVIPGGXXXXXX 1116
            AGKS+MV+LPTGAGKS+CYQ+PA++L G+T+V+SPLVALM DQLKQLPPVI GG      
Sbjct: 326  AGKSTMVVLPTGAGKSICYQIPAMILPGITVVVSPLVALMIDQLKQLPPVIQGGFLCSSQ 385

Query: 1117 XXXXXXXXXRQVQEGALKV 1173
                     R + +G +KV
Sbjct: 386  RSEEVAETVRLLIQGTIKV 404


>emb|CBI27562.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  165 bits (417), Expect = 2e-38
 Identities = 83/137 (60%), Positives = 103/137 (75%)
 Frame = +1

Query: 763  RLEKNEGTEIRLDLEVIEQAVLDVRHAPSDENLVKLLKLTHGYDSFRDGQLETIKLLLAG 942
            R+  +    ++ D E+IE A L+V++  SDE LVKLL LTHGYDSFRDGQLE I+++L G
Sbjct: 14   RVTMHRQGRVKFDGELIEAAALEVQNEASDEKLVKLLGLTHGYDSFRDGQLEAIRMVLEG 73

Query: 943  KSSMVILPTGAGKSLCYQLPALVLQGMTLVISPLVALMFDQLKQLPPVIPGGXXXXXXXX 1122
            KS+M++LPTGAGKSLCYQLPALVL G+TLV+SPLVALM DQLKQLPP+IPGG        
Sbjct: 74   KSTMLVLPTGAGKSLCYQLPALVLPGITLVVSPLVALMIDQLKQLPPMIPGGLLSSSQSA 133

Query: 1123 XXXXXXXRQVQEGALKV 1173
                   RQ++EG +KV
Sbjct: 134  EETSETLRQLREGTIKV 150


>gb|AAG50580.1|AC079280_11 ATP-dependent DNA helicase RecQ, putative [Arabidopsis thaliana]
          Length = 941

 Score =  153 bits (387), Expect = 7e-35
 Identities = 95/232 (40%), Positives = 130/232 (56%), Gaps = 7/232 (3%)
 Frame = +1

Query: 499  VVKKHPNLIGSCVFPTAQVSKPKFAN-----EGNFVRLNINGHGGRKKFANKVR--KRNP 657
            V +K PNLI   +  T+   KP         EGNFV+LN+NG  G KKF +K +   ++ 
Sbjct: 141  VRRKPPNLITDTI--TSPPVKPMVFRSNGNGEGNFVKLNLNGKRG-KKFPSKYKGVSKSR 197

Query: 658  NAYNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRLEKNEGTEIRLDLEVIEQAVLDVR 837
            ++Y+                                L+K    E    +  +E A+L V+
Sbjct: 198  SSYSFRGKRYKKKEADGDGESLLEEESD--------LQKQIEDEANGFISSVEDAILAVK 249

Query: 838  HAPSDENLVKLLKLTHGYDSFRDGQLETIKLLLAGKSSMVILPTGAGKSLCYQLPALVLQ 1017
               SDENL KLL L +GYDSFRDGQL+ IK++L G S+M++LPTGAGKSLCYQ+PA++L 
Sbjct: 250  TEASDENLTKLLNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMILP 309

Query: 1018 GMTLVISPLVALMFDQLKQLPPVIPGGXXXXXXXXXXXXXXXRQVQEGALKV 1173
            G+TLV+SPLV+LM DQLK LP +I GG               R+++EG +KV
Sbjct: 310  GITLVVSPLVSLMIDQLKHLPSIIKGGLLSSSQRPEEATETLRKLKEGIIKV 361


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