BLASTX nr result

ID: Atractylodes22_contig00018733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018733
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]   148   1e-33
ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240...   144   3e-32
ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|2...   133   6e-29
ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc...   131   2e-28
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc...   131   2e-28

>emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]
          Length = 1971

 Score =  148 bits (374), Expect = 1e-33
 Identities = 106/223 (47%), Positives = 130/223 (58%), Gaps = 39/223 (17%)
 Frame = +3

Query: 69   KSFNLKFDNQSA-DRNLASLDLDRGNNHAFGVENNLPLRSYGFWDGNRIQTGFPSLPDS- 242
            KS NLKF      D NL +  +DR  N+  G+EN LP+ SYGFWDGNRIQTGF SLPDS 
Sbjct: 1537 KSVNLKFTGHHCIDGNLGASKVDR--NNYLGLEN-LPM-SYGFWDGNRIQTGFSSLPDST 1592

Query: 243  ---SKYPAAFGN---PTNLELQQQSHSFVKSGNEQQNLNVVPGFQTRELGSNNRCANYH- 401
               +KYPAAF N    ++ +++QQS   V   NE +NLN +  F TR++ S+N  A+YH 
Sbjct: 1593 LLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNE-RNLNGISVFPTRDMSSSNGVADYHQ 1651

Query: 402  AYRSQEV--VQPFTVD-----KLLSEMPRRKDSEPLSSLQQQGR-----------GILVS 527
             +R ++   +QPFTVD      L SEM RR   E +SSLQ  GR           GILV 
Sbjct: 1652 VFRGRDCTKLQPFTVDMKQRQDLFSEMQRRNGFEAVSSLQAPGRGMVGMNVVGRGGILVG 1711

Query: 528  GACN-GVSDPVTAIRMHYAKTKQK-----------GESWRSNG 620
            GAC   VSDPV AI+MHYAKT  +            ESWR NG
Sbjct: 1712 GACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDESWRGNG 1754


>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
          Length = 1940

 Score =  144 bits (362), Expect = 3e-32
 Identities = 104/220 (47%), Positives = 128/220 (58%), Gaps = 39/220 (17%)
 Frame = +3

Query: 69   KSFNLKFDNQSA-DRNLASLDLDRGNNHAFGVENNLPLRSYGFWDGNRIQTGFPSLPDS- 242
            KS NLKF      D NL +  +DR  N+  G+EN LP+ SYGFWDGNRIQTGF SLPDS 
Sbjct: 1646 KSVNLKFTGHHCIDGNLGASKVDR--NNYLGLEN-LPM-SYGFWDGNRIQTGFSSLPDST 1701

Query: 243  ---SKYPAAFGN---PTNLELQQQSHSFVKSGNEQQNLNVVPGFQTRELGSNNRCANYH- 401
               +KYPAAF N    ++ +++QQS   V   NE +NLN +  F TR++ S+N  A+YH 
Sbjct: 1702 LLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNE-RNLNGISVFPTRDMSSSNGVADYHQ 1760

Query: 402  AYRSQEV--VQPFTVD-----KLLSEMPRRKDSEPLSSLQQQGR-----------GILVS 527
             +R ++   +QPFTVD      L SEM RR   E +SSLQ  GR           GILV 
Sbjct: 1761 VFRGRDCTKLQPFTVDMKQRQDLFSEMQRRNGFEAVSSLQAPGRGMVGMNVVGRGGILVG 1820

Query: 528  GACN-GVSDPVTAIRMHYAKTKQK-----------GESWR 611
            GAC   VSDPV AI+MHYAKT  +            ESWR
Sbjct: 1821 GACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDESWR 1860


>ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|222865394|gb|EEF02525.1|
            predicted protein [Populus trichocarpa]
          Length = 1659

 Score =  133 bits (334), Expect = 6e-29
 Identities = 97/231 (41%), Positives = 125/231 (54%), Gaps = 26/231 (11%)
 Frame = +3

Query: 6    NGTLQANDKCTATHLEKPNGRKSFNLKFDNQSADRNLASLDLDRGNNHAFGVENNLPLRS 185
            N + + N +  A HL KP   KS   KF          +L     NN   G+EN +P+RS
Sbjct: 1430 NSSARENGEKEAQHL-KPTS-KSSTFKFTGHHPTEGNMTLSKCDPNNQP-GLEN-VPMRS 1485

Query: 186  YGFWDGNRIQTGFPSLPDSS----KYPAAFGN--PTNLELQQQSHSFVKSGNEQQNLNVV 347
            YGFWDGNRIQTGFPS+PDS+    KYPAAF N   ++ ++ QQ+       NE  NLN +
Sbjct: 1486 YGFWDGNRIQTGFPSMPDSATLLVKYPAAFSNYHVSSSKMPQQTLQAAVKSNE-CNLNGI 1544

Query: 348  PGFQTRELGSNNRCANYHAYRSQEV--VQPFTVDK-----LLSEMPR--RKDSEPLSSLQ 500
              F +RE+  +N   +Y  YRS +   V  FTVD      +L+EM R   + +  ++ + 
Sbjct: 1545 SVFPSREITGSNGVVDYQMYRSHDSTGVPSFTVDMKQREVILAEMQRLNGQQTRGMAGVN 1604

Query: 501  QQGR-GILVSGACNGVSDPVTAIRMHYAKTKQKG----------ESWRSNG 620
              GR GILV GAC GVSDPV AI+ HYAK  Q G          ESWR  G
Sbjct: 1605 VVGRGGILVGGACTGVSDPVAAIKRHYAKADQYGGQSGIVFREEESWRGKG 1655


>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1655

 Score =  131 bits (330), Expect = 2e-28
 Identities = 99/233 (42%), Positives = 127/233 (54%), Gaps = 40/233 (17%)
 Frame = +3

Query: 42   THLEKPNGRKSFNLKFD-NQSADRNLASLDLDRGNNHAFGVENNLPLRSYGFWDGNRIQT 218
            +H  K N  KS NL F  +Q++D NL  L         FG+EN +P+ SYG+W+GN IQ+
Sbjct: 1431 SHHPKLNN-KSSNLNFTGHQNSDENLNFLK--------FGLEN-VPVMSYGYWEGNAIQS 1480

Query: 219  ---GFPSLPDSS----KYPAAFGN-PT---NLELQQQSHSFVKSGNEQQNLNVVPGFQTR 365
               G  SLPDSS    KYPAAF N PT   NLE Q    +F K  N Q++L     F  R
Sbjct: 1481 RQSGLSSLPDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAK--NSQRHLTGASTFTAR 1538

Query: 366  ELGSNNRCANYHAYRSQE--VVQPFTVD-----KLLSEMPRRKDSEPLSSLQQQGRG--- 515
            ++  +N   +Y  +R ++   VQPF VD      L SEM RR   E +SSLQQQGRG   
Sbjct: 1539 DVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQDLFSEMQRRHSFEAISSLQQQGRGMMG 1598

Query: 516  --------ILVSGACNGVSDPVTAIRMHYAKTKQKG----------ESWRSNG 620
                    ILV G+C+GVSDPV AI+MHY+ +++ G          ESW   G
Sbjct: 1599 MNSVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDESWGGKG 1651


>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1682

 Score =  131 bits (330), Expect = 2e-28
 Identities = 99/233 (42%), Positives = 127/233 (54%), Gaps = 40/233 (17%)
 Frame = +3

Query: 42   THLEKPNGRKSFNLKFD-NQSADRNLASLDLDRGNNHAFGVENNLPLRSYGFWDGNRIQT 218
            +H  K N  KS NL F  +Q++D NL  L         FG+EN +P+ SYG+W+GN IQ+
Sbjct: 1458 SHHPKLNN-KSSNLNFTGHQNSDENLNFLK--------FGLEN-VPVMSYGYWEGNAIQS 1507

Query: 219  ---GFPSLPDSS----KYPAAFGN-PT---NLELQQQSHSFVKSGNEQQNLNVVPGFQTR 365
               G  SLPDSS    KYPAAF N PT   NLE Q    +F K  N Q++L     F  R
Sbjct: 1508 RQSGLSSLPDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAK--NSQRHLTGASTFTAR 1565

Query: 366  ELGSNNRCANYHAYRSQE--VVQPFTVD-----KLLSEMPRRKDSEPLSSLQQQGRG--- 515
            ++  +N   +Y  +R ++   VQPF VD      L SEM RR   E +SSLQQQGRG   
Sbjct: 1566 DVNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQDLFSEMQRRHSFEAISSLQQQGRGMMG 1625

Query: 516  --------ILVSGACNGVSDPVTAIRMHYAKTKQKG----------ESWRSNG 620
                    ILV G+C+GVSDPV AI+MHY+ +++ G          ESW   G
Sbjct: 1626 MNSVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDESWGGKG 1678


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