BLASTX nr result

ID: Atractylodes22_contig00018707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018707
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    83   3e-14
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    78   7e-13
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...    78   8e-13
gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]    77   1e-12
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...    77   1e-12

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +3

Query: 81  RNWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNIDD 260
           RNW ELP ++ ++IL R+GV +ILENAQKVC +WR++CKDP+MWR I ID+     +I  
Sbjct: 7   RNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGN-RDIFK 65

Query: 261 RKATAMWKNAVDRSQ 305
               +M ++AVDRSQ
Sbjct: 66  YDLDSMCRHAVDRSQ 80



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
 Frame = +3

Query: 81  RNWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNIDD 260
           RNW ELP ++ ++IL R+G  DILENAQKVC +WR++CKDP+MWR I +D      N+ D
Sbjct: 345 RNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKIDMD------NLGD 398

Query: 261 RKATA-----MWKNAVDRSQ 305
             A       M ++AVDRSQ
Sbjct: 399 LGAMGYDLEIMCRHAVDRSQ 418


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = +3

Query: 81  RNWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNIDD 260
           RNW ELP  + ++IL R+G  +IL+NAQKVC  W ++CKDP+MWR I ID+R      +D
Sbjct: 179 RNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNR------ND 232

Query: 261 RKA-----TAMWKNAVDRS 302
           R A      +M ++AVDRS
Sbjct: 233 RAAFKYDLESMCRHAVDRS 251


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/76 (47%), Positives = 54/76 (71%)
 Frame = +3

Query: 78  TRNWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNID 257
           +RNW ELP ++ + IL+R+G  +ILENAQKVC +WR++CKDP+MWR I + +     ++ 
Sbjct: 15  SRNWTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLEDM- 73

Query: 258 DRKATAMWKNAVDRSQ 305
           +     M ++AVDRSQ
Sbjct: 74  EFNLDIMCRHAVDRSQ 89


>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = +3

Query: 84  NWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNIDDR 263
           NW ELP ++ + IL+R+G  +ILENAQKVC +WR++CKDP+MWR I + +     ++ D 
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM-DY 76

Query: 264 KATAMWKNAVDRSQ 305
               M ++AVDRSQ
Sbjct: 77  NLEIMCRHAVDRSQ 90


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = +3

Query: 84  NWLELPEDVMANILYRVGVFDILENAQKVCTAWRKICKDPAMWRVICIDSRPPFVNIDDR 263
           NW ELP ++ + IL+R+G  +ILENAQKVC +WR++CKDP+MWR I + +     ++ D 
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM-DY 76

Query: 264 KATAMWKNAVDRSQ 305
               M ++AVDRSQ
Sbjct: 77  NLEIMCRHAVDRSQ 90


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