BLASTX nr result

ID: Atractylodes22_contig00018643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00018643
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]   188   2e-45
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   180   4e-43
ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215...   179   8e-43
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   177   4e-42
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   176   6e-42

>emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]
          Length = 746

 Score =  188 bits (477), Expect = 2e-45
 Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
 Frame = -1

Query: 504 NVNAVSVHLWHQRFGHPSNKKLELIRDKLSIECLASKDKHV--CSVCPMAKQKRLPFVSL 331
           N N V   + +Q F + + K  +L   K  + C  S+      C +CP+AKQ+R  F S 
Sbjct: 61  NNNTVVNQVSNQSFSNSTVKTDQLDALKNHLHCDVSQLNKALPCYICPLAKQRRFSFDSH 120

Query: 330 NKMSNKPFDIIHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWVYLIKHKSEAQVIVPRFF 151
           N MS  PFD++HCD+WGPY + SH  ++ F+T+ DDC+RFTW++L+K KS+   I+P+FF
Sbjct: 121 NHMSQFPFDLVHCDIWGPYSVSSHARHRYFLTLGDDCSRFTWIFLLKQKSDVGTIIPKFF 180

Query: 150 DMIFTQFDMKIKIFR*DNAKELMFTEFFQNRGVLHQYSCVERPQQNSVVE 1
           +M+ TQF+ KIK+FR DNA EL FT+FF +RGVLHQ+SCVERPQQNS+VE
Sbjct: 181 NMVVTQFNAKIKVFRSDNAPELAFTDFFNDRGVLHQFSCVERPQQNSIVE 230


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  180 bits (457), Expect = 4e-43
 Identities = 82/164 (50%), Positives = 110/164 (67%)
 Frame = -1

Query: 492  VSVHLWHQRFGHPSNKKLELIRDKLSIECLASKDKHVCSVCPMAKQKRLPFVSLNKMSNK 313
            VS  +WH+R GHPS  +++ +   + I    +  K VC +CP+AKQ+RL F  LN ++  
Sbjct: 1792 VSASMWHKRMGHPSISRIKELAKMIEISDFPNC-KEVCHICPLAKQRRLSFPILNNIAEN 1850

Query: 312  PFDIIHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWVYLIKHKSEAQVIVPRFFDMIFTQ 133
             FD+IHCD+WGP+   +H G+  F TIVDD +R+TWVYL+KHKS+   ++PRFF +I TQ
Sbjct: 1851 IFDLIHCDIWGPFKTPTHAGHSYFATIVDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQ 1910

Query: 132  FDMKIKIFR*DNAKELMFTEFFQNRGVLHQYSCVERPQQNSVVE 1
            F   IK+FR DNA EL F + F   G  HQ+SC   PQQNSVVE
Sbjct: 1911 FSKVIKVFRSDNAPELNFRDLFAKTGTTHQFSCAYTPQQNSVVE 1954



 Score =  169 bits (428), Expect = 1e-39
 Identities = 77/160 (48%), Positives = 106/160 (66%)
 Frame = -1

Query: 480 LWHQRFGHPSNKKLELIRDKLSIECLASKDKHVCSVCPMAKQKRLPFVSLNKMSNKPFDI 301
           +WH+R GHPS  +++ +   + I    +  K V  +CP+AKQ+RL F  LN ++   F++
Sbjct: 371 MWHKRMGHPSISRIKELAKMIEISDFPNC-KEVYHICPLAKQRRLSFPILNNIAENVFEL 429

Query: 300 IHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWVYLIKHKSEAQVIVPRFFDMIFTQFDMK 121
           IHCD+WGP+   +H G+    TIVDD +R+TWVYL+KHKS+   ++PRFF +I TQF   
Sbjct: 430 IHCDIWGPFKTPTHAGHSYSATIVDDKSRYTWVYLLKHKSDILQVIPRFFKLIETQFSKV 489

Query: 120 IKIFR*DNAKELMFTEFFQNRGVLHQYSCVERPQQNSVVE 1
           IK+FR DNA EL F + F   G  HQ+SC   PQQNSVVE
Sbjct: 490 IKVFRSDNAPELNFRDLFAKTGTTHQFSCAYTPQQNSVVE 529



 Score = 90.1 bits (222), Expect(2) = 4e-16
 Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
 Frame = -3

Query: 1033 LWEELSNFKSHCSCGKCTCGGAKEM------DHTMNFLMGLNDSYSQLRGQIILMDPLPP 872
            +W+EL  ++      +CTC G+K+M      +  M FLMGLN+SYSQ+R QI+L+DPLPP
Sbjct: 1449 IWQELVEYRP---MDECTCEGSKKMIDFLNAEFVMIFLMGLNESYSQIRAQILLIDPLPP 1505

Query: 871  VNRIFSLVIQEERQRGVGTN 812
            +NR+FSL+IQEERQR +G++
Sbjct: 1506 INRVFSLIIQEERQRSIGSS 1525



 Score = 21.6 bits (44), Expect(2) = 4e-16
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 776  NNTKNFNQPYKNFKKDQFPVCTYC 705
            N+ + F+   K+ KKD  P+C+ C
Sbjct: 1536 NSERRFSSD-KSKKKDTRPICSNC 1558


>ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215551 [Cucumis sativus]
          Length = 528

 Score =  179 bits (455), Expect = 8e-43
 Identities = 89/184 (48%), Positives = 117/184 (63%), Gaps = 7/184 (3%)
 Frame = -1

Query: 540 YLLYILEEEQLVN-------VNAVSVHLWHQRFGHPSNKKLELIRDKLSIECLASKDKHV 382
           Y LY+ +     N       VN+ +  LWHQR GHPS   L+ ++  L ++   S   H 
Sbjct: 308 YGLYVFKLRNAFNLQSLICAVNSDNTFLWHQRLGHPSVDVLKSLQSMLQLKSFTS---HT 364

Query: 381 CSVCPMAKQKRLPFVSLNKMSNKPFDIIHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWV 202
           C+ C +AKQ+RL F S N +S   FD+IH D+WGP    +H G+  F+TIVDD TRFTWV
Sbjct: 365 CTTCSLAKQRRLSFSSNNHVSPNSFDLIHVDIWGPLSTATHAGHTYFLTIVDDATRFTWV 424

Query: 201 YLIKHKSEAQVIVPRFFDMIFTQFDMKIKIFR*DNAKELMFTEFFQNRGVLHQYSCVERP 22
           +++K KS+ + I+P FF +I TQ    IK  R DNA ELMFTEFF+ +GVLHQ+SCV  P
Sbjct: 425 FMLKQKSDVKQIIPNFFKLIETQHGKTIKHMRSDNAPELMFTEFFKEKGVLHQFSCVNCP 484

Query: 21  QQNS 10
           QQNS
Sbjct: 485 QQNS 488



 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 42/89 (47%), Positives = 64/89 (71%), Gaps = 6/89 (6%)
 Frame = -3

Query: 1033 LWEELSNFKSHCSCGKCTCGGAKEM------DHTMNFLMGLNDSYSQLRGQIILMDPLPP 872
            L +EL+ ++  C+CG C+C G +EM      ++ M+FLMGLN+++SQ RGQ++LMDPLP 
Sbjct: 104  LIDELNTYRPGCTCGTCSCDGVREMTDFLQMEYLMDFLMGLNENFSQARGQLLLMDPLPS 163

Query: 871  VNRIFSLVIQEERQRGVGTNNLENQSMAF 785
             +R FSL++QEE QR +G+ +    +MAF
Sbjct: 164  TSRAFSLLLQEEEQRSIGSLSSTASAMAF 192


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  177 bits (449), Expect = 4e-42
 Identities = 83/180 (46%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
 Frame = -1

Query: 534  LYILEEEQ-LVNVNAV-SVHLWHQRFGHPSNKKLELIRDKLSIECLASKDKHVCSVCPMA 361
            LY+L+ +   ++VNAV  V +WH+R GHPS  +L+ + + L      +K    C VC +A
Sbjct: 548  LYVLDTQSPAISVNAVVDVSVWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVCHLA 607

Query: 360  KQKRLPFVSLNKMSNKPFDIIHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWVYLIKHKS 181
            KQK+L F S N + N  F+++H DVWGP+ +E+  GYK F+TIVDD +R TW+YL+K KS
Sbjct: 608  KQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKS 667

Query: 180  EAQVIVPRFFDMIFTQFDMKIKIFR*DNAKELMFTEFFQNRGVLHQYSCVERPQQNSVVE 1
            +   + P F D++  Q+D ++K  R DNAKEL FTEF++ +G++  +SC E P+QNSVVE
Sbjct: 668  DVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPEQNSVVE 727


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  176 bits (447), Expect = 6e-42
 Identities = 86/187 (45%), Positives = 124/187 (66%), Gaps = 9/187 (4%)
 Frame = -1

Query: 534 LYILEEEQL--------VNVNAVSVH-LWHQRFGHPSNKKLELIRDKLSIECLASKDKHV 382
           LYI++ + L        + V +V+ H LWH+R GHPS +KL+ +   LS     +     
Sbjct: 379 LYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFH 438

Query: 381 CSVCPMAKQKRLPFVSLNKMSNKPFDIIHCDVWGPYHIESHRGYKNFVTIVDDCTRFTWV 202
           C VC ++KQK LPFVS N  S++PFD+IH D WGP+ +++H GY+ F+TIVDD +R TWV
Sbjct: 439 CRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWV 498

Query: 201 YLIKHKSEAQVIVPRFFDMIFTQFDMKIKIFR*DNAKELMFTEFFQNRGVLHQYSCVERP 22
           YL+++KS+   ++P F  M+  QF+  IK  R DNA EL FT+F+ ++G++  +SC E P
Sbjct: 499 YLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPETP 558

Query: 21  QQNSVVE 1
           QQNSVVE
Sbjct: 559 QQNSVVE 565


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