BLASTX nr result

ID: Atractylodes22_contig00017988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017988
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633621.1| PREDICTED: uncharacterized protein LOC100855...    58   1e-06
ref|XP_002512597.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_003633621.1| PREDICTED: uncharacterized protein LOC100855194 [Vitis vinifera]
          Length = 154

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
 Frame = +1

Query: 214 RRKVWVVLSRIKTAKKEKENRGSSGR------CCLCIKRFPPLDSCKESPVSDPNSSEFS 375
           + K  +V S  K ++    +   SG+      C LC K+   ++S   S  SDPN+  F+
Sbjct: 66  KAKKQLVYSGRKRSRSSSSSASFSGKREGFVGCFLCFKQPQTMESPANSQTSDPNNPAFT 125

Query: 376 FDSLRGLIEKSDFFLNECNTHLDV 447
           ++ L+ LIEK+DF+  ECN H+D+
Sbjct: 126 YEHLKVLIEKNDFYSKECNPHIDI 149


>ref|XP_002512597.1| conserved hypothetical protein [Ricinus communis]
           gi|223548558|gb|EEF50049.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
 Frame = +1

Query: 247 KTAKKEKENRGSS------------GRCCLCIKRFPPLDSCKESPVSDPNSSEFSFDSLR 390
           K  KK+ + R SS            G+ C C+K+   L S  +S  SDPN  +F+F+ LR
Sbjct: 179 KLLKKKSDKRPSSSSSSLSSRVAVTGKNCFCLKQNFTLQSPTDSQTSDPNHPKFTFEMLR 238

Query: 391 GLIEKSDFFLNECNT 435
            LIEK+DF+  ECNT
Sbjct: 239 TLIEKNDFYSKECNT 253


Top